RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ZNF705AQ6ZN79 300 aaPredicted RBP10.64□□□□□ -0.71
VPS33B-205ENST00000556096 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
VPS33B-205ENST00000556096 PKD1L1Q8TDX9 2849 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 TRBV27A0A0K0K1C4 114 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 H7C1H1 209 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 RHODO00212 210 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 H0Y8G0 127 aa10.63□□□□□ -0.71
VPS33B-205ENST00000556096 RS1O15537 224 aa10.63□□□□□ -0.71
VPS33B-205ENST00000556096 G0S2P27469 103 aa10.63□□□□□ -0.71
VPS33B-205ENST00000556096 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
VPS33B-205ENST00000556096 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
VPS33B-205ENST00000556096 WIPF1O43516 503 aa10.62□□□□□ -0.71
VPS33B-205ENST00000556096 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
VPS33B-205ENST00000556096 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
VPS33B-205ENST00000556096 MRPL16Q9NX20 251 aaKnown RBP10.62□□□□□ -0.71
VPS33B-205ENST00000556096 FBN3Q75N90 2809 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 DAZ2Q13117 558 aaKnown RBP10.61□□□□□ -0.71
VPS33B-205ENST00000556096 MAJINQ3KP22 176 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 ZFP2Q6ZN57 461 aa10.61□□□□□ -0.71
VPS33B-205ENST00000556096 IGLL1P15814 213 aa10.6□□□□□ -0.71
VPS33B-205ENST00000556096 DEFA6Q01524 100 aa10.6□□□□□ -0.71
VPS33B-205ENST00000556096 PRSS1P07477 247 aa10.59□□□□□ -0.71
VPS33B-205ENST00000556096 IGLC3P0DOY3 106 aa10.59□□□□□ -0.71
VPS33B-205ENST00000556096 C2orf66Q6UXQ4 117 aa10.59□□□□□ -0.71
VPS33B-205ENST00000556096 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
VPS33B-205ENST00000556096 PMCHL2Q9BQD1 86 aa10.59□□□□□ -0.71
VPS33B-205ENST00000556096 IGHV3-73A0A0B4J1V6 119 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
VPS33B-205ENST00000556096 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 RRN3P1Q2M238 152 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 NOTCH3Q9UM47 2321 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 TRGV1A0A0A0MS02 117 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 RHOHQ15669 191 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 OVOL2Q9BRP0 275 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 UQCR10Q9UDW1 63 aa10.58□□□□□ -0.72
VPS33B-205ENST00000556096 I3L3M4 83 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 ODF1Q14990 250 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 Q6ZSN1 163 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 ERASQ7Z444 233 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 DNAJC30Q96LL9 226 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 CYSLTR1Q9Y271 337 aa10.57□□□□□ -0.72
VPS33B-205ENST00000556096 Q6ZN92 141 aa10.56□□□□□ -0.72
VPS33B-205ENST00000556096 OR4C5Q8NGB2 326 aa10.56□□□□□ -0.72
VPS33B-205ENST00000556096 TNFRSF18Q9Y5U5 241 aa10.56□□□□□ -0.72
VPS33B-205ENST00000556096 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 TRAV4A0A0B4J268 109 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 NACAE9PAV3 2078 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 Q6ZTI0 123 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 KIR2DL5BQ8NHK3 375 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 NOP10Q9NPE3 64 aaKnown RBP10.55□□□□□ -0.72
VPS33B-205ENST00000556096 DKK2Q9UBU2 259 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 CIDEAO60543 219 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 TSHBP01222 138 aa10.55□□□□□ -0.72
VPS33B-205ENST00000556096 A0A087WX48 190 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 G3V4G9 280 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 P0DMU3 169 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 FAM231AP0DMU4 169 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 FAM231CP0DMU5 169 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 NEXN-AS1Q8NBZ9 246 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
VPS33B-205ENST00000556096 SMIM9A6NGZ8 99 aa10.53□□□□□ -0.72
VPS33B-205ENST00000556096 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
VPS33B-205ENST00000556096 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
VPS33B-205ENST00000556096 TP53TG1Q9Y2A0 90 aa10.53□□□□□ -0.72
VPS33B-205ENST00000556096 ZNF479Q96JC4 524 aa10.53□□□□□ -0.72
VPS33B-205ENST00000556096 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
VPS33B-205ENST00000556096 DPM2O94777 84 aa10.52□□□□□ -0.73
VPS33B-205ENST00000556096 IGKCP01834 107 aa10.52□□□□□ -0.73
VPS33B-205ENST00000556096 APOC4P55056 127 aa10.52□□□□□ -0.73
VPS33B-205ENST00000556096 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
VPS33B-205ENST00000556096 BAALCQ8WXS3 180 aa10.52□□□□□ -0.73
VPS33B-205ENST00000556096 TRBV10-1A0A0K0K1A3 114 aa10.51□□□□□ -0.73
VPS33B-205ENST00000556096 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
VPS33B-205ENST00000556096 MRPL35Q9NZE8 188 aaKnown RBP10.51□□□□□ -0.73
VPS33B-205ENST00000556096 Q9UF83 564 aa10.51□□□□□ -0.73
VPS33B-205ENST00000556096 RPL39P62891 51 aaKnown RBP10.5□□□□□ -0.73
VPS33B-205ENST00000556096 DEFB104AQ8WTQ1 72 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 HHLA3Q9XRX5 114 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 X6R8D5 127 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 GAGE12BA1L429 117 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 F8VRH5 84 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 GAGE7O76087 117 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 PLNP26678 52 aa10.5□□□□□ -0.73
VPS33B-205ENST00000556096 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms