RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 HLA-DRB4X5D2U9 266 aa5.02□□□□□ -1.61
SLIRP-204ENST00000555890 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 KNCNA6PVL3 124 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 D6R8Y8 96 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 H3BMM0 161 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 GNRH2O43555 120 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 SAP30O75446 220 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 S100A12P80511 92 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 TDRG1Q3Y452 100 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 PYY3Q5JQD4 70 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 FA2HQ7L5A8 372 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 OR10AG1Q8NH19 301 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 PRSS3P2Q8NHM4 247 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 RCHY1Q96PM5 261 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 MAP6D1Q9H9H5 199 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
SLIRP-204ENST00000555890 AGRNO00468 2067 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 IGHV1OR15-1A0A075B7D0 117 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 A8MTW9 85 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 OR11H12B2RN74 326 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 M0R2Z0 102 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 M0R381 172 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 CD7P09564 240 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 FOXI1Q12951 378 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 SPINK13Q1W4C9 94 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 AMTNQ6UX39 209 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 Q6ZQT7 251 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 MAP1LC3AQ9H492 121 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
SLIRP-204ENST00000555890 SORL1Q92673 2214 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 TRAV12-2A0A075B6T6 113 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 PCP4L1A6NKN8 68 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 SMIM17P0DL12 118 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 EVI2AP22794 236 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 KRTDAPP60985 99 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 STHQ8IWL8 128 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 FAM19A2Q8N3H0 131 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 MRAP2Q96G30 205 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 RNF185Q96GF1 192 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 AP1S3Q96PC3 154 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 C20orf144Q9BQM9 153 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 DPH3P1Q9H4G8 78 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 SCRT2Q9NQ03 307 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
SLIRP-204ENST00000555890 ZNF256Q9Y2P7 627 aaPredicted RBP4.99□□□□□ -1.61
SLIRP-204ENST00000555890 HSPG2P98160 4391 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 FLG2Q5D862 2391 aaPredicted RBP4.98□□□□□ -1.61
SLIRP-204ENST00000555890 IGHV3-16A0A0C4DH30 117 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 LOC389332A0A1B0GUA5 103 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 LEPROTL1O95214 131 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 PPP1R17O96001 155 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 INSP01308 110 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 IGLV1-51P01701 117 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 RNASE3P12724 160 aaKnown RBP4.98□□□□□ -1.61
SLIRP-204ENST00000555890 FXYD7P58549 80 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 NUTF2P61970 127 aaKnown RBP4.98□□□□□ -1.61
SLIRP-204ENST00000555890 URB1-AS1Q96HZ7 61 aa4.98□□□□□ -1.61
SLIRP-204ENST00000555890 NXT2Q9NPJ8 142 aaKnown RBP4.98□□□□□ -1.61
SLIRP-204ENST00000555890 IGHV1-24A0A0C4DH33 117 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 SMKR1H3BMG3 65 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 NXPH4O95158 308 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 NCR2O95944 276 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 NPYP01303 97 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 MGPP08493 103 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 IFI27P40305 119 aaPredicted RBP4.97□□□□□ -1.61
SLIRP-204ENST00000555890 INSL3P51460 131 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 ODF3L2Q3SX64 289 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 C14orf178Q8N769 122 aaPredicted RBP4.97□□□□□ -1.61
SLIRP-204ENST00000555890 Q8N8P6 123 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 C9orf85Q96MD7 179 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 LINC00467Q9BRT7 94 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 SPXQ9BT56 116 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 HSPB8Q9UJY1 196 aa4.97□□□□□ -1.61
SLIRP-204ENST00000555890 C20orf202A1L168 122 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 TSTD3H0UI37 97 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 CRXO43186 299 aaPredicted RBP4.96□□□□□ -1.62
SLIRP-204ENST00000555890 C3orf79P0CE67 100 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 PKIAP61925 76 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 PMCHL1Q16048 86 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 SUMO4Q6EEV6 95 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 TRPT1Q86TN4 253 aaKnown RBP4.96□□□□□ -1.62
SLIRP-204ENST00000555890 DEFB125Q8N687 156 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 LINC01587Q99440 93 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 C20orf78Q9BR46 151 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 TMEM70Q9BUB7 260 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 MDFICQ9P1T7 246 aa4.96□□□□□ -1.62
SLIRP-204ENST00000555890 LINC01546A6NGU7 62 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 HBDP02042 147 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 HTN1P15515 57 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 KRTAP10-11P60412 298 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 ZNF415Q09FC8 603 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 C9orf66Q5T8R8 295 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 MORN3Q6PF18 240 aaPredicted RBP4.95□□□□□ -1.62
SLIRP-204ENST00000555890 POM121L12Q8N7R1 296 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 NRACQ8N912 160 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 PTH2Q96A98 100 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 TMEM208Q9BTX3 173 aa4.95□□□□□ -1.62
SLIRP-204ENST00000555890 C1QTNF4Q9BXJ3 329 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms