RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZNF876PQ49A33 203 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 MDFICQ9P1T7 246 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 VPREB3Q9UKI3 123 aa5.2□□□□□ -1.58
TDP1-213ENST00000555880 CELSR2Q9HCU4 2923 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 COL12A1Q99715 3063 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 USP9YO00507 2555 aaPredicted RBP5.19□□□□□ -1.58
TDP1-213ENST00000555880 I3L3M4 83 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 TGFAP01135 160 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 HOXD3P31249 432 aaPredicted RBP5.19□□□□□ -1.58
TDP1-213ENST00000555880 WFDC2Q14508 124 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 KLHL30-AS1Q8NEE0 82 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 DEFB104AQ8WTQ1 72 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 DLX4Q92988 240 aaPredicted RBP5.19□□□□□ -1.58
TDP1-213ENST00000555880 PLEKHB2Q96CS7 222 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 UBE2E2Q96LR5 201 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 SPANXB1Q9NS25 103 aaPredicted RBP5.19□□□□□ -1.58
TDP1-213ENST00000555880 CREBBPQ92793 2442 aa5.19□□□□□ -1.58
TDP1-213ENST00000555880 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 A0A0J9YY99 117 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 J3QQQ9 107 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 UBE2D1P51668 147 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 CFAP161Q6P656 301 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 MORN3Q6PF18 240 aaPredicted RBP5.18□□□□□ -1.58
TDP1-213ENST00000555880 C10orf99Q6UWK7 81 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 AMTNQ6UX39 209 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 NRGNQ92686 78 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 UTP20O75691 2785 aaKnown RBP5.18□□□□□ -1.58
TDP1-213ENST00000555880 CENPEQ02224 2701 aa5.18□□□□□ -1.58
TDP1-213ENST00000555880 APOMO95445 188 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 NFE4Q86UQ8 179 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 C20orf203Q8NBC4 194 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 DUX5Q96PT3 197 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 BEX4Q9NWD9 120 aaPredicted RBP5.17□□□□□ -1.58
TDP1-213ENST00000555880 DOPEY2Q9Y3R5 2298 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 LEPROTO15243 131 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 TSPAN13O95857 204 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 ETDBQ3ZM63 59 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 TCTEX1D4Q5JR98 221 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 RNF152Q8N8N0 203 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 SLC25A29Q8N8R3 303 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 ZNRF2Q8NHG8 242 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 VCX2Q9H322 139 aa5.17□□□□□ -1.58
TDP1-213ENST00000555880 MYO9AB2RTY4 2548 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 HTN1P15515 57 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 PSMB2P49721 201 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 NDUFA11Q86Y39 141 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 SIGMAR1Q99720 223 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 ZNF702PQ9H963 129 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 LRRK2Q5S007 2527 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 SORL1Q92673 2214 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 FAM208BQ5VWN6 2430 aa5.16□□□□□ -1.58
TDP1-213ENST00000555880 POLQO75417 2590 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 TRBV20-1A0A075B6N2 111 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 TMEM223A0PJW6 202 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 A8MWV9 139 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 IGHV3-30P01768 117 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 IGHV3-30-5P0DP03 117 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 TSPEAR-AS2P59090 65 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 DEFB113Q30KQ7 82 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 Q6YL49 198 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 DUX3Q96PT4 197 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 EDA2RQ9HAV5 297 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 PEMTQ9UBM1 199 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 PRO1854Q9UHT4 67 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 PRO0461Q9UI25 63 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 TSSC4Q9Y5U2 329 aaPredicted RBP5.15□□□□□ -1.58
TDP1-213ENST00000555880 TNFRSF18Q9Y5U5 241 aa5.15□□□□□ -1.58
TDP1-213ENST00000555880 CRYBG3Q68DQ2 2970 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 TRAV2A0A0B4J234 112 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 GAGE12HA6NDE8 117 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 KNCNA6PVL3 124 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 RHODO00212 210 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 CD28P10747 220 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 DEFB131AP59861 70 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 UBE2D3P61077 147 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 UBE2D2P62837 147 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 ZNF415Q09FC8 603 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 Q5PR19 223 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 SFTA2Q6UW10 78 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 LRRC75A-AS1Q8N1F1 130 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 MTURNQ8N3F0 131 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 ATP6V0E2Q8NHE4 81 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 OPRPNQ99935 248 aaPredicted RBP5.15□□□□□ -1.59
TDP1-213ENST00000555880 C1QTNF4Q9BXJ3 329 aa5.15□□□□□ -1.59
TDP1-213ENST00000555880 ZANQ9Y493 2812 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 IGLV4-3A0A075B6K6 122 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 A0A096LNT2 108 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 J3QKU1 62 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 M0R2P5 195 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 SCGB1C2P0DMR2 95 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 P0DMU3 169 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 FAM231AP0DMU4 169 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 FAM231CP0DMU5 169 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 SCGB1A1P11684 91 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 ZNF22P17026 224 aaPredicted RBP5.14□□□□□ -1.59
TDP1-213ENST00000555880 CRYBA4P53673 196 aa5.14□□□□□ -1.59
TDP1-213ENST00000555880 PIK3CD-AS1Q5SR53 167 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms