RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 FAM162BQ5T6X4 162 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 SFT2D1Q8WV19 159 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 BTF3L4Q96K17 158 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 DNAJC30Q96LL9 226 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 ZFP30Q9Y2G7 519 aa6.19□□□□□ -1.42
VIPAS39-207ENST00000555854 A0A087WWL8 130 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 TRAV8-6A0A0B4J262 113 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 COLCA2A8K830 154 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 TMEM250H0YL14 139 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 EREGO14944 169 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 SRP19P09132 144 aaKnown RBP6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 AKR1C3P42330 323 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 UBE2G1P62253 170 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 LAGE3Q14657 143 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 CST9LP1Q5W188 147 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 SFRP2Q96HF1 295 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 MLST8Q9BVC4 326 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 RPS10P5Q9NQ39 176 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 VAX2Q9UIW0 290 aa6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
VIPAS39-207ENST00000555854 M0R381 172 aa6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 RHODO00212 210 aa6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 FAM74A4Q5TZK3 123 aa6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 DAZ4Q86SG3 579 aaKnown RBP6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 Q8N814 137 aa6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 DAZ3Q9NR90 486 aaKnown RBP6.17□□□□□ -1.42
VIPAS39-207ENST00000555854 S100A8P05109 93 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 BCL2P10415 239 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 GCSHP23434 173 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 CCL20P78556 96 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 Q5VSD8 79 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 OR10AG1Q8NH19 301 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 FAM30AQ9NZY2 134 aa6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
VIPAS39-207ENST00000555854 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 EPM2AB3EWF7 344 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 C9JQL5 133 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 SNAI2O43623 268 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 PSCAO43653 123 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 S100A6P06703 90 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 CXCL1P09341 107 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 UBE2D3P61077 147 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 UBE2D2P62837 147 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 NIT1Q86X76 327 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 ZFP82Q8N141 532 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 NTN5Q8WTR8 489 aaPredicted RBP6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 DERL1Q9BUN8 251 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 PHLDA3Q9Y5J5 127 aa6.15□□□□□ -1.42
VIPAS39-207ENST00000555854 MUC21A0A0G2JKD1 596 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 MUC21A0A140T8X8 626 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 LECT2O14960 151 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 IGLV2-8P01709 118 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 RAB5AP20339 215 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 PRR27Q6MZM9 219 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 CBLN2Q8IUK8 224 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 OR10G8Q8NGN5 311 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 C11orf52Q96A22 123 aa6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
VIPAS39-207ENST00000555854 TRBV10-1A0A0K0K1A3 114 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 PDE6DO43924 150 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 S100A9P06702 114 aaKnown RBP6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 RPL35P42766 123 aaKnown RBP6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 S100A12P80511 92 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 MEF2BQ02080 365 aaPredicted RBP6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 TMEM241Q24JQ0 296 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 Q6ZSA8 131 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 BAGE2Q86Y30 109 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 NEXN-AS1Q8NBZ9 246 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 ANAPC16Q96DE5 110 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 NAT8Q9UHE5 227 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 KIF25-AS1Q9Y6Z4 181 aa6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
VIPAS39-207ENST00000555854 TRBV20OR9-2A0A075B6H5 130 aa6.12□□□□□ -1.43
VIPAS39-207ENST00000555854 PPP1R2P9O14990 202 aa6.12□□□□□ -1.43
VIPAS39-207ENST00000555854 OR5AL1P0C617 328 aa6.12□□□□□ -1.43
VIPAS39-207ENST00000555854 GNG13Q9P2W3 67 aa6.12□□□□□ -1.43
VIPAS39-207ENST00000555854 TRBV7-3A0A075B6L6 115 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 TRBV24-1A0A075B6N3 115 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 TRAV8-3A0A0A6YYJ7 113 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 ZNF727A8MUV8 499 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 IGLC6P0CF74 106 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 GZMBP10144 247 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 S100PP25815 95 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 ZNF56Q15929 161 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 LINC01620Q4KN68 170 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 CENPWQ5EE01 88 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 LINC00518Q8N0U6 118 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
VIPAS39-207ENST00000555854 IMMP2LQ96T52 175 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms