RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 ASIPP42127 132 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
ATXN3-233ENST00000555816 SULT1A1P50225 295 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 PPT1P50897 306 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 HBG1P69891 147 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 HBG2P69892 147 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 AKR1C1Q04828 323 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 AKR1C8PQ5T2L2 129 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 LYZL2Q7Z4W2 148 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 STX12Q86Y82 276 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 TMEM252Q8N6L7 170 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 ODF3Q96PU9 254 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 ATP5SQ99766 215 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 TXNDC17Q9BRA2 123 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 HIGD1AQ9Y241 93 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 TIMM9Q9Y5J7 89 aa3.17□□□□□ -1.9
ATXN3-233ENST00000555816 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 F8WDY8 70 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
ATXN3-233ENST00000555816 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
ATXN3-233ENST00000555816 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
ATXN3-233ENST00000555816 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 PRB4P10163 310 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-233ENST00000555816 ATP6V0CP27449 155 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 TCL1AP56279 114 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 PLP1P60201 277 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 LCN15Q6UWW0 184 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 RASL10AQ92737 203 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 WFDC1Q9HC57 220 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 ZNF331Q9NQX6 463 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-233ENST00000555816 LRP2P98164 4655 aa3.16□□□□□ -1.9
ATXN3-233ENST00000555816 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
ATXN3-233ENST00000555816 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 C7orf71A4D174 169 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 TMEM250H0YL14 139 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 H3BQ15 152 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 AGPAT2O15120 278 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
ATXN3-233ENST00000555816 MPDU1O75352 247 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 OR5G3P0C626 314 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.91
ATXN3-233ENST00000555816 SELENOTP62341 195 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
ATXN3-233ENST00000555816 CYP2G1PQ6ZSU1 146 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 HSD17B11Q8NBQ5 300 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 OR5C1Q8NGR4 320 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 BLNKQ8WV28 456 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 CIB3Q96Q77 187 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-233ENST00000555816 SMIM3Q9BZL3 60 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 MRPL16Q9NX20 251 aaKnown RBP3.15□□□□□ -1.91
ATXN3-233ENST00000555816 VAX2Q9UIW0 290 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 PXMP4Q9Y6I8 212 aa3.15□□□□□ -1.91
ATXN3-233ENST00000555816 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 TRAV8-3A0A0A6YYJ7 113 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 IGSF23A1L1A6 192 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 SMCO3A2RU48 225 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 FAM24AA6NFZ4 105 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 KLLNB2CW77 178 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 C9JCJ5 164 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 SYNGR2O43760 224 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 SSSCA1O60232 199 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 SNRPCP09234 159 aaKnown RBP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 LINC00869P0C866 280 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 BCL2P10415 239 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 IAPPP10997 89 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 POLR2GP62487 172 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 WFDC2Q14508 124 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 LAGE3Q14657 143 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 ELOBQ15370 118 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
ATXN3-233ENST00000555816 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 Q6ZRU5 148 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 BPIFA4PQ86YQ2 179 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 Q8N976 141 aa3.14□□□□□ -1.91
ATXN3-233ENST00000555816 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms