RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 MUSTN1Q8IVN3 82 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 FAM223BA6NKX1 122 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 FAM223AQ8IWN6 122 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 C10orf126Q8N4M7 172 aa13.26□□□□□ -0.29
RCCD1-204ENST00000555737 TRAV8-3A0A0A6YYJ7 113 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 C19orf84I3L1E1 186 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 PROK1P58294 105 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 ELANEP08246 267 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 LINC00315P59091 139 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 TEN1Q86WV5 123 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 Q8N1Y9 231 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 RNF183Q96D59 192 aa13.25□□□□□ -0.29
RCCD1-204ENST00000555737 SONP18583 2426 aaKnown RBP13.25□□□□□ -0.29
RCCD1-204ENST00000555737 IGHV4-61A0A0C4DH41 118 aa13.24□□□□□ -0.29
RCCD1-204ENST00000555737 SOCS3O14543 225 aa13.24□□□□□ -0.29
RCCD1-204ENST00000555737 SLC25A20O43772 301 aa13.24□□□□□ -0.29
RCCD1-204ENST00000555737 SCGB1A1P11684 91 aa13.24□□□□□ -0.29
RCCD1-204ENST00000555737 KLRB1Q12918 225 aa13.24□□□□□ -0.29
RCCD1-204ENST00000555737 DAZ1Q9NQZ3 744 aaKnown RBP13.24□□□□□ -0.29
RCCD1-204ENST00000555737 LENEPQ9Y5L5 61 aa13.24□□□□□ -0.29
RCCD1-204ENST00000555737 TRBV20-1A0A075B6N2 111 aa13.23□□□□□ -0.29
RCCD1-204ENST00000555737 IGHV1-69DA0A0B4J2H0 117 aa13.23□□□□□ -0.29
RCCD1-204ENST00000555737 IGHV1-69P01742 117 aa13.23□□□□□ -0.29
RCCD1-204ENST00000555737 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
RCCD1-204ENST00000555737 ERG28Q9UKR5 140 aa13.23□□□□□ -0.29
RCCD1-204ENST00000555737 POLR2KP53803 58 aaKnown RBP13.23□□□□□ -0.29
RCCD1-204ENST00000555737 MAPK1IP1LQ8NDC0 245 aa13.23□□□□□ -0.29
RCCD1-204ENST00000555737 VCX2Q9H322 139 aa13.23□□□□□ -0.29
RCCD1-204ENST00000555737 DAND5Q8N907 189 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 UBE2D3P61077 147 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 UBE2D2P62837 147 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 LYRM7Q5U5X0 104 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 SLC25A29Q8N8R3 303 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 PPP1R17O96001 155 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 ANAPC13Q9BS18 74 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 Q9UF83 564 aa13.22□□□□□ -0.29
RCCD1-204ENST00000555737 IGHV3-38A0A0C4DH36 116 aa13.21□□□□□ -0.3
RCCD1-204ENST00000555737 ZFYVE26Q68DK2 2539 aa13.2□□□□□ -0.3
RCCD1-204ENST00000555737 ID1P41134 155 aa13.2□□□□□ -0.3
RCCD1-204ENST00000555737 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
RCCD1-204ENST00000555737 JMJD1CQ15652 2540 aa13.19□□□□□ -0.3
RCCD1-204ENST00000555737 CD28P10747 220 aa13.19□□□□□ -0.3
RCCD1-204ENST00000555737 PAPPA-AS1Q5QFB9 102 aa13.19□□□□□ -0.3
RCCD1-204ENST00000555737 TEX49A0A1B0GTD5 131 aa13.19□□□□□ -0.3
RCCD1-204ENST00000555737 HERV-K104P63124 156 aa13.19□□□□□ -0.3
RCCD1-204ENST00000555737 ZNF625Q96I27 306 aaPredicted RBP13.19□□□□□ -0.3
RCCD1-204ENST00000555737 DUX3Q96PT4 197 aa13.19□□□□□ -0.3
RCCD1-204ENST00000555737 PRRC2AP48634 2157 aaKnown RBP13.19□□□□□ -0.3
RCCD1-204ENST00000555737 EIF4EBP3O60516 100 aaPredicted RBP13.18□□□□□ -0.3
RCCD1-204ENST00000555737 NRGNQ92686 78 aa13.18□□□□□ -0.3
RCCD1-204ENST00000555737 ABCA12Q86UK0 2595 aa13.18□□□□□ -0.3
RCCD1-204ENST00000555737 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
RCCD1-204ENST00000555737 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
RCCD1-204ENST00000555737 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
RCCD1-204ENST00000555737 ZNF22P17026 224 aaPredicted RBP13.16□□□□□ -0.3
RCCD1-204ENST00000555737 LINC01619G3V211 115 aa13.16□□□□□ -0.3
RCCD1-204ENST00000555737 M0QY20 66 aa13.16□□□□□ -0.3
RCCD1-204ENST00000555737 IGHV3-33P01772 117 aa13.16□□□□□ -0.3
RCCD1-204ENST00000555737 KLLNB2CW77 178 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 TIMM17AQ99595 171 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 B5MCH6 92 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 RHODO00212 210 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 CRLF1O75462 422 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 USMG5Q96IX5 58 aa13.15□□□□□ -0.3
RCCD1-204ENST00000555737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
RCCD1-204ENST00000555737 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
RCCD1-204ENST00000555737 ZFAND6Q6FIF0 208 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 DCANP1Q8TF63 244 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 CLEC2BQ92478 149 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 AMELXQ99217 191 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 EPG5Q9HCE0 2579 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 CCDC168Q8NDH2 2452 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 A0A087WW49 117 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 ATP5J2P56134 94 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 TRAV4A0A0B4J268 109 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 SNRPD3P62318 126 aaKnown RBP13.14□□□□□ -0.31
RCCD1-204ENST00000555737 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 TIMM21Q9BVV7 248 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 FBN2P35556 2912 aa13.14□□□□□ -0.31
RCCD1-204ENST00000555737 TRBV27A0A0K0K1C4 114 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 AVPP01185 164 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 IGHG2P01859 326 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 GNLYP22749 145 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 IGHV3OR16-12A0A075B7B8 117 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 IGHV1OR15-1A0A075B7D0 117 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 TMEM223A0PJW6 202 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 SNCGO76070 127 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 IGHV4-59P01825 116 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 ATP6V0E2Q8NHE4 81 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 CFAP46Q8IYW2 2715 aa13.13□□□□□ -0.31
RCCD1-204ENST00000555737 IGHV4-30-2A0A087WSY4 118 aa13.12□□□□□ -0.31
RCCD1-204ENST00000555737 IGLV4-3A0A075B6K6 122 aa13.12□□□□□ -0.31
RCCD1-204ENST00000555737 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms