RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 F5H697 171 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 ATP5G1P05496 136 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 MGPP08493 103 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 HOXA5P20719 270 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 SLAQ13239 276 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 ZNF56Q15929 161 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 FAM104BQ5XKR9 115 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 C15orf53Q8NAA6 179 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 JPT2Q9H910 190 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 MUC4Q99102 2169 aa6.75□□□□□ -1.33
ACTN1-215ENST00000555616 H7C1H1 209 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 CRYGDP07320 174 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 Q0VG73 95 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 OR10J3Q5JRS4 329 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 SAMD10Q9BYL1 202 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 KIF25-AS1Q9Y6Z4 181 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
ACTN1-215ENST00000555616 TRGV4A0A0C4DH28 118 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 PPBPP02775 128 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 RAB4AP20338 218 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 SRIP30626 198 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 CKS2P33552 79 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 ZNF479Q96JC4 524 aa6.73□□□□□ -1.33
ACTN1-215ENST00000555616 ALKBH7Q9BT30 221 aaPredicted RBP6.73□□□□□ -1.33
ACTN1-215ENST00000555616 IGHV3-73A0A0B4J1V6 119 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 F5H768 121 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 PPP1R17O96001 155 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 LINC00315P59091 139 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 MRPL51Q4U2R6 128 aaKnown RBP6.72□□□□□ -1.33
ACTN1-215ENST00000555616 UFSP1Q6NVU6 142 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 BAGE3Q86Y29 109 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 UBE2DNLQ8IWF7 75 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 ORMDL3Q8N138 153 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 HIST3H2BBQ8N257 126 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 RNF185Q96GF1 192 aa6.72□□□□□ -1.33
ACTN1-215ENST00000555616 ESDP10768 282 aa6.71□□□□□ -1.34
ACTN1-215ENST00000555616 S100A2P29034 98 aa6.71□□□□□ -1.34
ACTN1-215ENST00000555616 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
ACTN1-215ENST00000555616 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.34
ACTN1-215ENST00000555616 TRAV26-2A0A0B4J265 109 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 TRBV6-4A0A1B0GX49 114 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 D6R8Y8 96 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 K7EQD1 137 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 NCR2O95944 276 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
ACTN1-215ENST00000555616 FHL2Q14192 279 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 RHOHQ15669 191 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 Q6ZR54 194 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 C18orf32Q8TCD1 76 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 PRELID3AQ96N28 172 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 PRADC1Q9BSG0 188 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
ACTN1-215ENST00000555616 TRAV26-1A0A087WT03 109 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 IFITM10A6NMD0 228 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 H3BNG1 76 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 M0QY20 66 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 SERF1AO75920 110 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 AKR1D1P51857 326 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 LINC00336Q6ZUF6 198 aa6.69□□□□□ -1.34
ACTN1-215ENST00000555616 SMKR1H3BMG3 65 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 TNFRSF6BO95407 300 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 NUDT3O95989 172 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 PDZD11Q5EBL8 140 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 Q6ZSN1 163 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 TMEM18Q96B42 140 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 DNAJC30Q96LL9 226 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 PACRGQ96M98 296 aaPredicted RBP6.68□□□□□ -1.34
ACTN1-215ENST00000555616 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 NIT2Q9NQR4 276 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
ACTN1-215ENST00000555616 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 IGLV2-18A0A075B6J9 118 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 M0R2N4 97 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 RTL8CO15255 209 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 PAX4O43316 350 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 NPYP01303 97 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 FABP4P15090 132 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 CRYBA4P53673 196 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 LINC00310P59036 64 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 RPL36AP83881 106 aaKnown RBP6.67□□□□□ -1.34
ACTN1-215ENST00000555616 IQCJQ1A5X6 159 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 NRACQ8N912 160 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 ZNRF2Q8NHG8 242 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 RPL36ALQ969Q0 106 aaKnown RBP6.67□□□□□ -1.34
ACTN1-215ENST00000555616 CHCHD1Q96BP2 118 aaKnown RBP6.67□□□□□ -1.34
ACTN1-215ENST00000555616 RPL39LQ96EH5 51 aaKnown RBP6.67□□□□□ -1.34
ACTN1-215ENST00000555616 C20orf78Q9BR46 151 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 MAP1LC3AQ9H492 121 aa6.67□□□□□ -1.34
ACTN1-215ENST00000555616 ST20Q9HBF5 79 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms