RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RBFOX3A6NFN3 312 aa16.22■□□□□ 0.19
PRKCH-216ENST00000555542 BCL2P10415 239 aa16.22■□□□□ 0.19
PRKCH-216ENST00000555542 WFDC2Q14508 124 aa16.22■□□□□ 0.19
PRKCH-216ENST00000555542 XKRY2A2RUG3 117 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 IGLV2-8P01709 118 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 P01737 135 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 MGPP08493 103 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 HAMPP81172 84 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 BAALCQ8WXS3 180 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 BIN3Q9NQY0 253 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 VAX2Q9UIW0 290 aa16.21■□□□□ 0.19
PRKCH-216ENST00000555542 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-216ENST00000555542 AKAP14Q86UN6 197 aa16.2■□□□□ 0.18
PRKCH-216ENST00000555542 TMEM70Q9BUB7 260 aa16.2■□□□□ 0.18
PRKCH-216ENST00000555542 C19orf71A6NCJ1 209 aa16.19■□□□□ 0.18
PRKCH-216ENST00000555542 Q5VSD8 79 aa16.19■□□□□ 0.18
PRKCH-216ENST00000555542 DNAJC30Q96LL9 226 aa16.19■□□□□ 0.18
PRKCH-216ENST00000555542 CHCHD5Q9BSY4 110 aa16.19■□□□□ 0.18
PRKCH-216ENST00000555542 hCG_2014768A0A024R1R8 64 aa16.18■□□□□ 0.18
PRKCH-216ENST00000555542 CRPP02741 224 aa16.18■□□□□ 0.18
PRKCH-216ENST00000555542 SMR3BP02814 79 aaPredicted RBP16.18■□□□□ 0.18
PRKCH-216ENST00000555542 IGLC6P0CF74 106 aa16.18■□□□□ 0.18
PRKCH-216ENST00000555542 TAGLN2P37802 199 aaKnown RBP16.18■□□□□ 0.18
PRKCH-216ENST00000555542 CACNG7P62955 275 aa16.18■□□□□ 0.18
PRKCH-216ENST00000555542 Q6ZNX1 250 aa16.18■□□□□ 0.18
PRKCH-216ENST00000555542 Q0VG73 95 aa16.17■□□□□ 0.18
PRKCH-216ENST00000555542 TMEM97Q5BJF2 176 aa16.17■□□□□ 0.18
PRKCH-216ENST00000555542 C15orf54Q8N8G6 183 aa16.17■□□□□ 0.18
PRKCH-216ENST00000555542 KIF25-AS1Q9Y6Z4 181 aa16.17■□□□□ 0.18
PRKCH-216ENST00000555542 PKIAP61925 76 aa16.16■□□□□ 0.18
PRKCH-216ENST00000555542 TRBV20OR9-2A0A075B6H5 130 aa16.15■□□□□ 0.18
PRKCH-216ENST00000555542 F2Z2F3 143 aa16.15■□□□□ 0.18
PRKCH-216ENST00000555542 H7C1H1 209 aa16.15■□□□□ 0.18
PRKCH-216ENST00000555542 ANGP03950 147 aaKnown RBP16.15■□□□□ 0.18
PRKCH-216ENST00000555542 MPV17L2Q567V2 206 aa16.15■□□□□ 0.18
PRKCH-216ENST00000555542 C1orf43Q9BWL3 253 aa16.15■□□□□ 0.18
PRKCH-216ENST00000555542 C9orf62Q8N4C0 152 aa16.14■□□□□ 0.17
PRKCH-216ENST00000555542 Q8N976 141 aa16.14■□□□□ 0.17
PRKCH-216ENST00000555542 TRGC1P0CF51 173 aa16.13■□□□□ 0.17
PRKCH-216ENST00000555542 INAFM2P0DMQ5 153 aa16.13■□□□□ 0.17
PRKCH-216ENST00000555542 TRBV25-1A0A075B6N4 114 aa16.12■□□□□ 0.17
PRKCH-216ENST00000555542 FAM229AH3BQW9 127 aa16.12■□□□□ 0.17
PRKCH-216ENST00000555542 SUMO4Q6EEV6 95 aa16.12■□□□□ 0.17
PRKCH-216ENST00000555542 LYZL1Q6UWQ5 148 aa16.12■□□□□ 0.17
PRKCH-216ENST00000555542 ALKAL2Q6UX46 152 aa16.11■□□□□ 0.17
PRKCH-216ENST00000555542 NUDT10Q8NFP7 164 aa16.11■□□□□ 0.17
PRKCH-216ENST00000555542 NUDT11Q96G61 164 aa16.11■□□□□ 0.17
PRKCH-216ENST00000555542 FAM30AQ9NZY2 134 aa16.11■□□□□ 0.17
PRKCH-216ENST00000555542 M0QY20 66 aa16.1■□□□□ 0.17
PRKCH-216ENST00000555542 ATRAIDQ6UW56 229 aa16.1■□□□□ 0.17
PRKCH-216ENST00000555542 NTM-AS1Q6ZSK4 140 aa16.1■□□□□ 0.17
PRKCH-216ENST00000555542 NTF3P20783 257 aa16.09■□□□□ 0.17
PRKCH-216ENST00000555542 BLOC1S1P78537 153 aa16.09■□□□□ 0.17
PRKCH-216ENST00000555542 GAGE6Q13070 117 aa16.09■□□□□ 0.17
PRKCH-216ENST00000555542 ENHOQ6UWT2 76 aa16.09■□□□□ 0.17
PRKCH-216ENST00000555542 DPH3P1Q9H4G8 78 aa16.09■□□□□ 0.17
PRKCH-216ENST00000555542 RPP21Q9H633 154 aaKnown RBP16.09■□□□□ 0.17
PRKCH-216ENST00000555542 IGHV1-24A0A0C4DH33 117 aa16.08■□□□□ 0.16
PRKCH-216ENST00000555542 NKX2-5P52952 324 aaPredicted RBP16.08■□□□□ 0.16
PRKCH-216ENST00000555542 RNASE7Q9H1E1 156 aaKnown RBP16.08■□□□□ 0.16
PRKCH-216ENST00000555542 TWIST1Q15672 202 aa16.07■□□□□ 0.16
PRKCH-216ENST00000555542 LINC01620Q4KN68 170 aa16.07■□□□□ 0.16
PRKCH-216ENST00000555542 RASL11AQ6T310 242 aa16.07■□□□□ 0.16
PRKCH-216ENST00000555542 HLA-DQA1P01909 254 aa16.06■□□□□ 0.16
PRKCH-216ENST00000555542 CTRLP40313 264 aa16.06■□□□□ 0.16
PRKCH-216ENST00000555542 C14orf177Q52M58 125 aa16.06■□□□□ 0.16
PRKCH-216ENST00000555542 CLPSL2Q6UWE3 100 aa16.06■□□□□ 0.16
PRKCH-216ENST00000555542 OCC1Q8TAD7 63 aa16.06■□□□□ 0.16
PRKCH-216ENST00000555542 K7EN84 100 aa16.05■□□□□ 0.16
PRKCH-216ENST00000555542 CEBPGP53567 150 aa16.05■□□□□ 0.16
PRKCH-216ENST00000555542 RBX1P62877 108 aa16.05■□□□□ 0.16
PRKCH-216ENST00000555542 MIAQ16674 131 aa16.05■□□□□ 0.16
PRKCH-216ENST00000555542 IQCJQ1A5X6 159 aa16.04■□□□□ 0.16
PRKCH-216ENST00000555542 WDR73Q6P4I2 378 aa16.04■□□□□ 0.16
PRKCH-216ENST00000555542 LINC00269Q8N2A0 174 aa16.03■□□□□ 0.16
PRKCH-216ENST00000555542 NIT2Q9NQR4 276 aa16.03■□□□□ 0.16
PRKCH-216ENST00000555542 TMEM250H0YL14 139 aa16.02■□□□□ 0.16
PRKCH-216ENST00000555542 Q6ZSA8 131 aa16.01■□□□□ 0.15
PRKCH-216ENST00000555542 SMIM15Q7Z3B0 74 aa16.01■□□□□ 0.15
PRKCH-216ENST00000555542 TMEM243Q9BU79 118 aa16.01■□□□□ 0.15
PRKCH-216ENST00000555542 GATCO43716 136 aaKnown RBP16■□□□□ 0.15
PRKCH-216ENST00000555542 DEFB104AQ8WTQ1 72 aa16■□□□□ 0.15
PRKCH-216ENST00000555542 USP17L23D6RBM5 183 aa15.99■□□□□ 0.15
PRKCH-216ENST00000555542 UBE2L6O14933 153 aa15.99■□□□□ 0.15
PRKCH-216ENST00000555542 CNFNQ9BYD5 112 aa15.99■□□□□ 0.15
PRKCH-216ENST00000555542 EIF5A2Q9GZV4 153 aaKnown RBP15.99■□□□□ 0.15
PRKCH-216ENST00000555542 PRR34Q9NV39 138 aa15.99■□□□□ 0.15
PRKCH-216ENST00000555542 COTL1Q14019 142 aa15.98■□□□□ 0.15
PRKCH-216ENST00000555542 PGLYRP4Q96LB8 373 aa15.98■□□□□ 0.15
PRKCH-216ENST00000555542 FAT1Q14517 4588 aa15.97■□□□□ 0.15
PRKCH-216ENST00000555542 REG3AQ06141 175 aa15.97■□□□□ 0.15
PRKCH-216ENST00000555542 LYPD6BQ8NI32 183 aa15.97■□□□□ 0.15
PRKCH-216ENST00000555542 GTSF1Q8WW33 167 aa15.97■□□□□ 0.15
PRKCH-216ENST00000555542 TRAV26-2A0A0B4J265 109 aa15.96■□□□□ 0.15
PRKCH-216ENST00000555542 AMTP48728 403 aa15.96■□□□□ 0.15
PRKCH-216ENST00000555542 IGLV10-54A0A075B6I4 117 aa15.95■□□□□ 0.14
PRKCH-216ENST00000555542 A8MWL6 223 aa15.95■□□□□ 0.14
PRKCH-216ENST00000555542 PLA2G1BP04054 148 aaKnown RBP15.95■□□□□ 0.14
PRKCH-216ENST00000555542 SCXQ7RTU7 201 aa15.95■□□□□ 0.14
PRKCH-216ENST00000555542 LINC00528Q8N1L1 170 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 285.8 ms