RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CCDC115Q96NT0 180 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 HOPXQ9BPY8 73 aaPredicted RBP-1.01□□□□□ -2.57
SNX6-204ENST00000555541 GID8Q9NWU2 228 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 DNAJC15Q9Y5T4 150 aa-1.01□□□□□ -2.57
SNX6-204ENST00000555541 IBTKQ9P2D0 1353 aaPredicted RBP-1.01□□□□□ -2.57
SNX6-204ENST00000555541 TRBV6-1A0A0K0K1D8 114 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 J3KT08 172 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 PIGYQ3MUY2 71 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 CLLU1Q5K131 121 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 Q5VV11 94 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 TRIQKQ629K1 86 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 USF3Q68DE3 2245 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 BAGE3Q86Y29 109 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 NUP210Q8TEM1 1887 aaPredicted RBP-1.02□□□□□ -2.57
SNX6-204ENST00000555541 STARD9Q9P2P6 4700 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 TGP01266 2768 aa-1.02□□□□□ -2.57
SNX6-204ENST00000555541 ZNF142P52746 1687 aaPredicted RBP-1.03□□□□□ -2.57
SNX6-204ENST00000555541 YPEL1O60688 119 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 MT-ND4LP03901 98 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 PAEPP09466 180 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 SPRR1BP22528 89 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 SPRR2AP35326 72 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 KRTAP6-2Q3LI66 62 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 RPL7L1Q6DKI1 246 aaKnown RBP-1.03□□□□□ -2.57
SNX6-204ENST00000555541 ATP11AUNQ6ZP68 121 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 BOLA2Q9H3K6 86 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 BANF2Q9H503 90 aa-1.03□□□□□ -2.57
SNX6-204ENST00000555541 EPPK1P58107 5090 aaKnown RBP-1.03□□□□□ -2.57
SNX6-204ENST00000555541 ERCC6L2Q5T890 1561 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 MXRA5Q9NR99 2828 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 SETD2Q9BYW2 2564 aaPredicted RBP-1.04□□□□□ -2.58
SNX6-204ENST00000555541 DPM2O94777 84 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 HLA-DRB4P13762 266 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 COX6B1P14854 86 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 TMEM35BQ8NCS4 154 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 RPRMQ9NS64 109 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 NDUFA12Q9UI09 145 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 ATPIF1Q9UII2 106 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 HLA-DRB4X5D2U9 266 aa-1.04□□□□□ -2.58
SNX6-204ENST00000555541 UHRF1BP1LA0JNW5 1464 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 MYH1P12882 1939 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 EIF3AQ14152 1382 aaKnown RBP-1.05□□□□□ -2.58
SNX6-204ENST00000555541 A6NIN4 97 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 I3L2K1 104 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 SPINK4O60575 86 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 OR9Q1Q8NGQ5 310 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 SYNMO15061 1565 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 MYH2Q9UKX2 1941 aa-1.05□□□□□ -2.58
SNX6-204ENST00000555541 URB1O60287 2271 aaKnown RBP-1.05□□□□□ -2.58
SNX6-204ENST00000555541 CASZ1Q86V15 1759 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 AKAP11Q9UKA4 1901 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 UBE2D1P51668 147 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 KLK9Q2XQG4 91 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 LINC01545Q5VT33 79 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 TMEM244Q5VVB8 128 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 OR8I2Q8N0Y5 310 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 C10orf82Q8WW14 230 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 KDM5CP41229 1560 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 KIF13AQ9H1H9 1805 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 WDR7Q9Y4E6 1490 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 NBPF19A0A087WUL8 3843 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 NRXN2Q9P2S2 1712 aa-1.06□□□□□ -2.58
SNX6-204ENST00000555541 PHIPQ8WWQ0 1821 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 IFNA17P01571 189 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 C9orf116Q5BN46 136 aaPredicted RBP-1.07□□□□□ -2.58
SNX6-204ENST00000555541 SDF2Q99470 211 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 PCBD2Q9H0N5 130 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 OVOS2A0A0G2JMS6 1433 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 FER1L6Q2WGJ9 1857 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 LRP6O75581 1613 aa-1.07□□□□□ -2.58
SNX6-204ENST00000555541 RNF213Q63HN8 5207 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 DNAH6Q9C0G6 4158 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 CLPSL1A2RUU4 121 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 TMEM238C9JI98 176 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 H0YJX3 145 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 SPRR2EP22531 72 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 SPANXN1Q5VSR9 72 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 SAMD13Q5VXD3 122 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 MNS1Q8NEH6 495 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 SMIM4Q8WVI0 70 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 LSM2Q9Y333 95 aaKnown RBP-1.08□□□□□ -2.58
SNX6-204ENST00000555541 ROCK1Q13464 1354 aa-1.08□□□□□ -2.58
SNX6-204ENST00000555541 HIVEP1P15822 2718 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 PCNX1Q96RV3 2341 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 MYO7BQ6PIF6 2116 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 PLXNA2O75051 1894 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 IQSEC2Q5JU85 1478 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 PIRTP0C851 137 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 G0S2P27469 103 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 UBE2G1P62253 170 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 TMEM128Q5BJH2 165 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 SPTSSBQ8NFR3 76 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 MAGOHBQ96A72 148 aaKnown RBP-1.09□□□□□ -2.58
SNX6-204ENST00000555541 AGPAT4-IT1Q9H0P7 198 aa-1.09□□□□□ -2.58
SNX6-204ENST00000555541 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.09□□□□□ -2.58
SNX6-204ENST00000555541 ERCC6Q03468 1493 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 CTXND1A0A1B0GTU2 59 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 TNFP01375 233 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 CMPK1P30085 196 aa-1.1□□□□□ -2.59
SNX6-204ENST00000555541 PPP1R2P3Q6NXS1 205 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms