RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ODF3L2Q3SX64 289 aa17.77■□□□□ 0.44
TMEM260-207ENST00000555497 C16orf95Q9H693 158 aa17.77■□□□□ 0.44
TMEM260-207ENST00000555497 F8VRH5 84 aa17.76■□□□□ 0.43
TMEM260-207ENST00000555497 TRBV27A0A0K0K1C4 114 aa17.76■□□□□ 0.43
TMEM260-207ENST00000555497 SIVA1O15304 175 aa17.76■□□□□ 0.43
TMEM260-207ENST00000555497 SMR3AQ99954 134 aa17.76■□□□□ 0.43
TMEM260-207ENST00000555497 CHTOPQ9Y3Y2 248 aaKnown RBP17.76■□□□□ 0.43
TMEM260-207ENST00000555497 TRAV8-6A0A0B4J262 113 aa17.75■□□□□ 0.43
TMEM260-207ENST00000555497 TSHBP01222 138 aa17.75■□□□□ 0.43
TMEM260-207ENST00000555497 PLNP26678 52 aa17.75■□□□□ 0.43
TMEM260-207ENST00000555497 RPL39P62891 51 aaKnown RBP17.75■□□□□ 0.43
TMEM260-207ENST00000555497 SEC11AP67812 179 aa17.75■□□□□ 0.43
TMEM260-207ENST00000555497 TP53TG1Q9Y2A0 90 aa17.75■□□□□ 0.43
TMEM260-207ENST00000555497 KIR2DL4Q99706 377 aa17.74■□□□□ 0.43
TMEM260-207ENST00000555497 CYSLTR1Q9Y271 337 aa17.74■□□□□ 0.43
TMEM260-207ENST00000555497 TSSC4Q9Y5U2 329 aaPredicted RBP17.74■□□□□ 0.43
TMEM260-207ENST00000555497 PRSS29PA6NIE9 313 aa17.74■□□□□ 0.43
TMEM260-207ENST00000555497 GCN1Q92616 2671 aaKnown RBP17.73■□□□□ 0.43
TMEM260-207ENST00000555497 NACAE9PAV3 2078 aa17.73■□□□□ 0.43
TMEM260-207ENST00000555497 GAGE12BA1L429 117 aa17.72■□□□□ 0.43
TMEM260-207ENST00000555497 IGIPA6NJ69 53 aa17.72■□□□□ 0.43
TMEM260-207ENST00000555497 TRAV25A0A0B4J276 109 aa17.72■□□□□ 0.43
TMEM260-207ENST00000555497 IGHV3-73A0A0B4J1V6 119 aa17.71■□□□□ 0.43
TMEM260-207ENST00000555497 PROK1P58294 105 aa17.71■□□□□ 0.43
TMEM260-207ENST00000555497 TRPT1Q86TN4 253 aaKnown RBP17.71■□□□□ 0.43
TMEM260-207ENST00000555497 MAPKAPK5-AS1Q8N8E1 139 aa17.71■□□□□ 0.43
TMEM260-207ENST00000555497 VPS25Q9BRG1 176 aa17.71■□□□□ 0.43
TMEM260-207ENST00000555497 NIPBLQ6KC79 2804 aaeCLIP17.7■□□□□ 0.42
TMEM260-207ENST00000555497 RIPPLY3P57055 190 aa17.7■□□□□ 0.42
TMEM260-207ENST00000555497 HSD52Q0P140 79 aa17.7■□□□□ 0.42
TMEM260-207ENST00000555497 LINC01587Q99440 93 aa17.7■□□□□ 0.42
TMEM260-207ENST00000555497 HILS1P60008 231 aa17.69■□□□□ 0.42
TMEM260-207ENST00000555497 C11orf72Q8NBR9 251 aa17.69■□□□□ 0.42
TMEM260-207ENST00000555497 M0R2P5 195 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 P0DMU3 169 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 FAM231AP0DMU4 169 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 FAM231CP0DMU5 169 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 UFSP1Q6NVU6 142 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 JMJD8Q96S16 334 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 XCL2Q9UBD3 114 aa17.68■□□□□ 0.42
TMEM260-207ENST00000555497 HECTD1Q9ULT8 2610 aa17.67■□□□□ 0.42
TMEM260-207ENST00000555497 TRBV25-1A0A075B6N4 114 aa17.67■□□□□ 0.42
TMEM260-207ENST00000555497 ZNF415Q09FC8 603 aa17.67■□□□□ 0.42
TMEM260-207ENST00000555497 K7ERU9 68 aa17.67■□□□□ 0.42
TMEM260-207ENST00000555497 INSP01308 110 aa17.67■□□□□ 0.42
TMEM260-207ENST00000555497 ZNF418Q8TF45 676 aaPredicted RBP17.67■□□□□ 0.42
TMEM260-207ENST00000555497 CLUHP3Q96NS8 147 aa17.67■□□□□ 0.42
TMEM260-207ENST00000555497 LINC00467Q9BRT7 94 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 HIGD1BQ9P298 99 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 GAGE10A6NGK3 116 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 ADARB2-AS1A8MUL3 147 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 H3BRM9 83 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 Q6ZSN1 163 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 Q9UF83 564 aa17.66■□□□□ 0.42
TMEM260-207ENST00000555497 A6NDN8 102 aa17.64■□□□□ 0.42
TMEM260-207ENST00000555497 AZU1P20160 251 aa17.64■□□□□ 0.42
TMEM260-207ENST00000555497 STHQ8IWL8 128 aa17.64■□□□□ 0.42
TMEM260-207ENST00000555497 IGLV4-69A0A075B6H9 119 aa17.64■□□□□ 0.41
TMEM260-207ENST00000555497 C9orf118A6NHY6 69 aa17.64■□□□□ 0.41
TMEM260-207ENST00000555497 OR11H12B2RN74 326 aa17.64■□□□□ 0.41
TMEM260-207ENST00000555497 NSUN5P1Q3KNT7 163 aa17.64■□□□□ 0.41
TMEM260-207ENST00000555497 TIMM17AQ99595 171 aa17.64■□□□□ 0.41
TMEM260-207ENST00000555497 CHAC1Q9BUX1 264 aa17.64■□□□□ 0.41
TMEM260-207ENST00000555497 HIVEP2P31629 2446 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 SETXQ7Z333 2677 aaKnown RBP17.63■□□□□ 0.41
TMEM260-207ENST00000555497 C1orf158Q8N1D5 194 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 TMEM141Q96I45 108 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 EDA2RQ9HAV5 297 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 LINC01549A6NIU2 74 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 EMP1P54849 157 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 SCGB2A2Q13296 93 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 RHOHQ15669 191 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 CFAP126Q5VTH2 177 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 GTF2H5Q6ZYL4 71 aa17.63■□□□□ 0.41
TMEM260-207ENST00000555497 MRPL16Q9NX20 251 aaKnown RBP17.63■□□□□ 0.41
TMEM260-207ENST00000555497 A8MWV9 139 aa17.62■□□□□ 0.41
TMEM260-207ENST00000555497 I3L3M4 83 aa17.62■□□□□ 0.41
TMEM260-207ENST00000555497 PTH2Q96A98 100 aa17.62■□□□□ 0.41
TMEM260-207ENST00000555497 OPRPNQ99935 248 aaPredicted RBP17.62■□□□□ 0.41
TMEM260-207ENST00000555497 SAP30O75446 220 aa17.62■□□□□ 0.41
TMEM260-207ENST00000555497 PMVKQ15126 192 aa17.62■□□□□ 0.41
TMEM260-207ENST00000555497 C11orf86A6NJI1 115 aa17.61■□□□□ 0.41
TMEM260-207ENST00000555497 PIK3CD-AS1Q5SR53 167 aa17.61■□□□□ 0.41
TMEM260-207ENST00000555497 JMJD1CQ15652 2540 aa17.6■□□□□ 0.41
TMEM260-207ENST00000555497 C20orf203Q8NBC4 194 aa17.6■□□□□ 0.41
TMEM260-207ENST00000555497 IGHV3OR16-12A0A075B7B8 117 aa17.59■□□□□ 0.41
TMEM260-207ENST00000555497 NDUFA7O95182 113 aa17.59■□□□□ 0.41
TMEM260-207ENST00000555497 LY6G6DO95868 133 aa17.59■□□□□ 0.41
TMEM260-207ENST00000555497 BEAN1Q3B7T3 259 aa17.59■□□□□ 0.41
TMEM260-207ENST00000555497 FXYD2P54710 66 aa17.58■□□□□ 0.4
TMEM260-207ENST00000555497 SPXQ9BT56 116 aa17.58■□□□□ 0.4
TMEM260-207ENST00000555497 E9PLD3 99 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 GCSHP23434 173 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 OR11H2Q8NH07 326 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 WFDC10AQ9H1F0 79 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 H3BUT2 72 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 K7EP34 96 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 KRTAP10-3P60369 221 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 PRADC1Q9BSG0 188 aa17.57■□□□□ 0.4
TMEM260-207ENST00000555497 NOTCH2Q04721 2471 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms