RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 RBFOX3A6NFN3 312 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 H7C1H1 209 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 Q0VG73 95 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 WDR73Q6P4I2 378 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 ATRAIDQ6UW56 229 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 Q8N3U1 123 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 FER1L6-AS1Q8NA97 138 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 OR2D3Q8NGH3 330 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 DNAJC30Q96LL9 226 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 MED9Q9NWA0 146 aa7.86□□□□□ -1.15
VRK1-204ENST00000555351 TRBV20OR9-2A0A075B6H5 130 aa7.85□□□□□ -1.15
VRK1-204ENST00000555351 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
VRK1-204ENST00000555351 P01737 135 aa7.85□□□□□ -1.15
VRK1-204ENST00000555351 BLOC1S1P78537 153 aa7.85□□□□□ -1.15
VRK1-204ENST00000555351 C9orf62Q8N4C0 152 aa7.85□□□□□ -1.15
VRK1-204ENST00000555351 EPM2AB3EWF7 344 aa7.84□□□□□ -1.15
VRK1-204ENST00000555351 F5H697 171 aa7.84□□□□□ -1.15
VRK1-204ENST00000555351 NDUFS6O75380 124 aaKnown RBP7.84□□□□□ -1.15
VRK1-204ENST00000555351 TRGC1P0CF51 173 aa7.84□□□□□ -1.15
VRK1-204ENST00000555351 FUSP35637 526 aaKnown RBP eCLIP7.84□□□□□ -1.15
VRK1-204ENST00000555351 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
VRK1-204ENST00000555351 KLK12Q9UKR0 248 aa7.84□□□□□ -1.15
VRK1-204ENST00000555351 MUC21A0A0G2JKD1 596 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 MUC21A0A140T8X8 626 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 TMEM250H0YL14 139 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 M0QY20 66 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 CTRLP40313 264 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 Q8N976 141 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 CNFNQ9BYD5 112 aa7.83□□□□□ -1.16
VRK1-204ENST00000555351 TMEM262E9PQX1 116 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 J3QL48 77 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 GZMBP10144 247 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 NUDT10Q8NFP7 164 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 FRZBQ92765 325 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 UBE2WQ96B02 151 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 TPPP3Q9BW30 176 aa7.82□□□□□ -1.16
VRK1-204ENST00000555351 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 TRBV25-1A0A075B6N4 114 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 IGKV2D-24A0A075B6R9 120 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 WFDC2Q14508 124 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 IQCJQ1A5X6 159 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 NTM-AS1Q6ZSK4 140 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 DPH3P1Q9H4G8 78 aa7.81□□□□□ -1.16
VRK1-204ENST00000555351 CRPP02741 224 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 NTF3P20783 257 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 SSTP61278 116 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 MIAQ16674 131 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 C14orf177Q52M58 125 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 MPV17L2Q567V2 206 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 RASL11AQ6T310 242 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 ALKAL2Q6UX46 152 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 Q6ZSA8 131 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 OCC1Q8TAD7 63 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 CHCHD5Q9BSY4 110 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 C1orf43Q9BWL3 253 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 RPP21Q9H633 154 aaKnown RBP7.8□□□□□ -1.16
VRK1-204ENST00000555351 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
VRK1-204ENST00000555351 IGHV1-24A0A0C4DH33 117 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 K7EN84 100 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 MGPP08493 103 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 ENHOQ6UWT2 76 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 FAM231DQ6ZW35 169 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 NIT2Q9NQR4 276 aa7.79□□□□□ -1.16
VRK1-204ENST00000555351 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
VRK1-204ENST00000555351 ANGP03950 147 aaKnown RBP7.78□□□□□ -1.16
VRK1-204ENST00000555351 CT83Q5H943 113 aa7.78□□□□□ -1.16
VRK1-204ENST00000555351 Q5VSD8 79 aa7.78□□□□□ -1.16
VRK1-204ENST00000555351 A0A1B0GUV1 79 aa7.77□□□□□ -1.17
VRK1-204ENST00000555351 LECT2O14960 151 aa7.77□□□□□ -1.17
VRK1-204ENST00000555351 FOXA3P55318 350 aaPredicted RBP7.77□□□□□ -1.17
VRK1-204ENST00000555351 RBX1P62877 108 aa7.77□□□□□ -1.17
VRK1-204ENST00000555351 TWIST1Q15672 202 aa7.77□□□□□ -1.17
VRK1-204ENST00000555351 TEX261Q6UWH6 196 aa7.77□□□□□ -1.17
VRK1-204ENST00000555351 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
VRK1-204ENST00000555351 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
VRK1-204ENST00000555351 hCG_2014768A0A024R1R8 64 aa7.76□□□□□ -1.17
VRK1-204ENST00000555351 A8MWL6 223 aa7.76□□□□□ -1.17
VRK1-204ENST00000555351 SMIM15Q7Z3B0 74 aa7.76□□□□□ -1.17
VRK1-204ENST00000555351 FAM210AQ96ND0 272 aa7.76□□□□□ -1.17
VRK1-204ENST00000555351 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
VRK1-204ENST00000555351 TRAV8-4A0A0B4J246 113 aa7.75□□□□□ -1.17
VRK1-204ENST00000555351 FAM231BA6NCW3 169 aa7.75□□□□□ -1.17
VRK1-204ENST00000555351 GATCO43716 136 aaKnown RBP7.75□□□□□ -1.17
VRK1-204ENST00000555351 INAFM2P0DMQ5 153 aa7.75□□□□□ -1.17
VRK1-204ENST00000555351 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
VRK1-204ENST00000555351 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
VRK1-204ENST00000555351 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
VRK1-204ENST00000555351 NCR2O95944 276 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 GAGE6Q13070 117 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 COTL1Q14019 142 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 DGAT2L7PQ6IED9 249 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 LINC00269Q8N2A0 174 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 SMIM7Q9BQ49 75 aa7.74□□□□□ -1.17
VRK1-204ENST00000555351 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms