RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 V9GYH0 126 aa2.13□□□□□ -2.07
PSEN1-211ENST00000554995 SPTBN1Q01082 2364 aaKnown RBP2.13□□□□□ -2.07
PSEN1-211ENST00000554995 HIVEP3Q5T1R4 2406 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 TRAV36DV7A0A075B6V5 113 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 M0R129 80 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 CD14P08571 375 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 IL7P13232 177 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 POLR2HP52434 150 aaKnown RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 LSM3P62310 102 aaKnown RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 EIF3IQ13347 325 aaKnown RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 CDK5R1Q15078 307 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 C10orf55Q5SWW7 151 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 EIF5AL1Q6IS14 154 aaKnown RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 TMEM91Q6ZNR0 172 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 AKAP14Q86UN6 197 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 PATE1Q8WXA2 126 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 TCEAL2Q9H3H9 227 aaPredicted RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 MED11Q9P086 117 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 PAIP2BQ9ULR5 123 aaKnown RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 STAB1Q9NY15 2570 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 MED13Q9UHV7 2174 aa2.12□□□□□ -2.07
PSEN1-211ENST00000554995 HRNRQ86YZ3 2850 aaPredicted RBP2.12□□□□□ -2.07
PSEN1-211ENST00000554995 DNAJC13O75165 2243 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 PDCD5O14737 125 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 LYZL6O75951 148 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 STATHP02808 62 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 CXCL1P09341 107 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 RPS25P62851 125 aaKnown RBP2.11□□□□□ -2.07
PSEN1-211ENST00000554995 SSBP1Q04837 148 aaKnown RBP2.11□□□□□ -2.07
PSEN1-211ENST00000554995 LINC01590Q5TEZ4 76 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 TCTE3Q8IZS6 198 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 Q8N2B8 174 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 OR10K1Q8NGX5 313 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 ADAT1Q9BUB4 502 aaKnown RBP2.11□□□□□ -2.07
PSEN1-211ENST00000554995 OR52A1Q9UKL2 312 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 DCHS2Q6V1P9 2916 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 RTTNQ86VV8 2226 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 AKAP9Q99996 3911 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 PLCE1Q9P212 2302 aa2.11□□□□□ -2.07
PSEN1-211ENST00000554995 NOTCH1P46531 2555 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 NBEAL2Q6ZNJ1 2754 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 TRAV27A0A087WT01 109 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 NAP1L6A6NFF2 107 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 IFITM5A6NNB3 132 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 A8MWV9 139 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 FAM25AB3EWG3 89 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 FAM25CB3EWG5 89 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 FAM25GB3EWG6 89 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 GABARAPH6UMI1 98 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 LYRM1O43325 122 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 CD2P06729 351 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 BRS3P32247 399 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 BTG2P78543 158 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 DCDP81605 110 aaKnown RBP2.1□□□□□ -2.07
PSEN1-211ENST00000554995 PLCXD2Q0VAA5 305 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 PDE6HQ13956 83 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 DEFB133Q30KQ1 61 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 DEFB113Q30KQ7 82 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 DEFB110Q30KQ9 67 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 C1orf140Q5VVS0 124 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 C15orf53Q8NAA6 179 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 OTOSQ8NHW6 89 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 GRPEL2Q8TAA5 225 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 SFT2D1Q8WV19 159 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 SMIM4Q8WVI0 70 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 TMEM203Q969S6 136 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 NAA38Q9BRA0 125 aaKnown RBP2.1□□□□□ -2.07
PSEN1-211ENST00000554995 LINC00467Q9BRT7 94 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 DDA1Q9BW61 102 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 RTL8AQ9BWD3 113 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 C14orf132Q9NPU4 83 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 TAS2R8Q9NYW2 309 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 IER3IP1Q9Y5U9 82 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 NUBP2Q9Y5Y2 271 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 MED12Q93074 2177 aa2.1□□□□□ -2.07
PSEN1-211ENST00000554995 TNRC6AQ8NDV7 1962 aaKnown RBP2.1□□□□□ -2.07
PSEN1-211ENST00000554995 FREM1Q5H8C1 2179 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 TRAV12-1A0A0B4J245 112 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 A0A1W2PRE2 83 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 ODAMA1E959 279 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 SNRPGP15A8MWD9 76 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 J3QLW9 94 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 DHFRP00374 187 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 APOC1P02654 83 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 RNASE3P12724 160 aaKnown RBP2.09□□□□□ -2.07
PSEN1-211ENST00000554995 S100A1P23297 94 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 FAUP35544 74 aaKnown RBP2.09□□□□□ -2.07
PSEN1-211ENST00000554995 RRAS2P62070 204 aaPredicted RBP2.09□□□□□ -2.07
PSEN1-211ENST00000554995 TMEM244Q5VVB8 128 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 OR5AK2Q8NH90 309 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 TSLPQ969D9 159 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 S100A16Q96FQ6 103 aaKnown RBP2.09□□□□□ -2.07
PSEN1-211ENST00000554995 CARD19Q96LW7 228 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 COMMD3Q9UBI1 195 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 GNG8Q9UK08 70 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 U3KQA8 63 aa2.09□□□□□ -2.07
PSEN1-211ENST00000554995 MED12LQ86YW9 2145 aa2.09□□□□□ -2.08
PSEN1-211ENST00000554995 PIN1P1O15428 100 aa2.08□□□□□ -2.08
PSEN1-211ENST00000554995 IL5P05113 134 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms