RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 IGKV3D-20A0A0C4DH25 116 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 GAGE10A6NGK3 116 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 M0R381 172 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 PDE6DO43924 150 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 LTAP01374 205 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 CRIP1P50238 77 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 FAM3BP58499 235 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-231ENST00000554994 RPL19P84098 196 aaKnown RBP3.23□□□□□ -1.89
ATXN3-231ENST00000554994 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-231ENST00000554994 SLAQ13239 276 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 SERTAD4-AS1Q5TG53 156 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 DERL1Q9BUN8 251 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 PRO0255Q9UI72 69 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 ICOSQ9Y6W8 199 aa3.23□□□□□ -1.89
ATXN3-231ENST00000554994 TRAV4A0A0B4J268 109 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 LOC100131303A0A0U1RQF7 123 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 P01737 135 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 SMIM17P0DL12 118 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 GZMBP10144 247 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 BCL2P10415 239 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 SRIP30626 198 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 CRYBA4P53673 196 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 MRPL23Q16540 153 aaKnown RBP3.22□□□□□ -1.89
ATXN3-231ENST00000554994 ESRGQ1W209 222 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 TDRG1Q3Y452 100 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 ZNF506Q5JVG8 444 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 DNLZQ5SXM8 178 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 OR2D3Q8NGH3 330 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 OCC1Q8TAD7 63 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 RASL10AQ92737 203 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 TXNDC17Q9BRA2 123 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 JPT2Q9H910 190 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 VPS13BQ7Z7G8 4022 aa3.22□□□□□ -1.89
ATXN3-231ENST00000554994 A0A087WWC5 75 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 A8MWV9 139 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 RS1O15537 224 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 MGPP08493 103 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
ATXN3-231ENST00000554994 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-231ENST00000554994 CFAP126Q5VTH2 177 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 Q9H8V8 135 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
ATXN3-231ENST00000554994 XKRY2A2RUG3 117 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 GAGE12JA6NER3 117 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 C5orf52A6NGY3 159 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 K7EQD1 137 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
ATXN3-231ENST00000554994 SCGB1D1O95968 90 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 ERVFC1-1P60608 527 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
ATXN3-231ENST00000554994 GAGE1Q13065 139 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 GAGE4Q13068 117 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 GAGE5Q13069 117 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 TWIST1Q15672 202 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 ZNF56Q15929 161 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 OR10J3Q5JRS4 329 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 SOHLH1Q5JUK2 328 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 C1orf134Q5TEV5 83 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 CFAP161Q6P656 301 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 ZFP82Q8N141 532 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 C14orf178Q8N769 122 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-231ENST00000554994 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 ATP6V0E2Q8NHE4 81 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
ATXN3-231ENST00000554994 PARLQ9H300 379 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-231ENST00000554994 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 NBDYA0A0U1RRE5 68 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 H3BNG1 76 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 PRYO14603 147 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 SIVA1O15304 175 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 CIDEAO60543 219 aa3.19□□□□□ -1.9
ATXN3-231ENST00000554994 NXPH4O95158 308 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms