RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 LEPP41159 167 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 SNRPD3P62318 126 aaKnown RBP4.14□□□□□ -1.75
ATXN3-230ENST00000554673 HBBP68871 147 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 KPRPQ5T749 579 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-230ENST00000554673 C9orf66Q5T8R8 295 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 FAM104BQ5XKR9 115 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 NIT1Q86X76 327 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 DEFB104AQ8WTQ1 72 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 RPL39LQ96EH5 51 aaKnown RBP4.14□□□□□ -1.75
ATXN3-230ENST00000554673 TIMM8BQ9Y5J9 83 aaPredicted RBP4.14□□□□□ -1.75
ATXN3-230ENST00000554673 MGAM2Q2M2H8 2515 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 SERF1AO75920 110 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 DUSP14O95147 198 aaKnown RBP4.13□□□□□ -1.75
ATXN3-230ENST00000554673 IGHV4-30-4P0DP06 118 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 NDUFA6P56556 154 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 PDZD11Q5EBL8 140 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 EBLN2Q6P2I7 272 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 Q6ZTI0 123 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 ATP5L2Q7Z4Y8 100 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 MRPL16Q9NX20 251 aaKnown RBP4.13□□□□□ -1.75
ATXN3-230ENST00000554673 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 TRAPPC1Q9Y5R8 145 aa4.13□□□□□ -1.75
ATXN3-230ENST00000554673 LINC01546A6NGU7 62 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 C1orf196B1AJZ1 125 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 D6R8Y8 96 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 ESDP10768 282 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 S100A7P31151 101 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 BMI1P35226 326 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 PAFAH1B2P68402 229 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 Q0VG73 95 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 PMCHL1Q16048 86 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 NEGR1Q7Z3B1 354 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 C14orf178Q8N769 122 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-230ENST00000554673 Q8NAQ8 132 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 HIST1H2BLQ99880 126 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 NDFIP1Q9BT67 221 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 TMEM191AQ9H0A3 160 aa4.12□□□□□ -1.75
ATXN3-230ENST00000554673 LOC100131303A0A0U1RQF7 123 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 M0R381 172 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 DEFB4AO15263 64 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 HLA-DQA1P01909 254 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 APCSP02743 223 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 LINC00694P0DN24 101 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 ASIPP42127 132 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 AMTP48728 403 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 RPS20P60866 119 aaKnown RBP4.11□□□□□ -1.75
ATXN3-230ENST00000554673 SAMD13Q5VXD3 122 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 KCNIP4Q6PIL6 250 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 C12orf54Q6X4T0 127 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 FAM19A2Q8N3H0 131 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 C3orf56Q8N813 242 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 PHLDA1Q8WV24 401 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-230ENST00000554673 ZNF479Q96JC4 524 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 OVOL2Q9BRP0 275 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 NDUFAF3Q9BU61 184 aa4.11□□□□□ -1.75
ATXN3-230ENST00000554673 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
ATXN3-230ENST00000554673 IGHV3OR16-12A0A075B7B8 117 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 M0QY20 66 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 RS1O15537 224 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 INSP01308 110 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 S100PP25815 95 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 IFI27P40305 119 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-230ENST00000554673 INSL3P51460 131 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 TWIST1Q15672 202 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 DEFB135Q30KP9 77 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 LINC01620Q4KN68 170 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 PYY3Q5JQD4 70 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 CFAP126Q5VTH2 177 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 SBSPONQ8IVN8 264 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 TMEM158Q8WZ71 300 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 BIN3Q9NQY0 253 aa4.1□□□□□ -1.75
ATXN3-230ENST00000554673 IGHV3-73A0A0B4J1V6 119 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 TSHBP01222 138 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 HTN1P15515 57 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 TSPOP30536 169 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
ATXN3-230ENST00000554673 RAB4BP61018 213 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 RAB5BP61020 215 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 RIGQ13278 110 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 MAPKAPK5-AS1Q8N8E1 139 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 PTH2Q96A98 100 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 LINC01587Q99440 93 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 MCRIP2Q9BUT9 160 aaKnown RBP4.09□□□□□ -1.75
ATXN3-230ENST00000554673 TP73-AS1Q9UF72 201 aa4.09□□□□□ -1.75
ATXN3-230ENST00000554673 MEGF8Q7Z7M0 2845 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 IGHV1-24A0A0C4DH33 117 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 MT-ND6P03923 174 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 CACNG7P62955 275 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 ZC2HC1BQ5TFG8 222 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 PRELID3AQ96N28 172 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 C20orf144Q9BQM9 153 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 CSTL1Q9H114 145 aa4.08□□□□□ -1.76
ATXN3-230ENST00000554673 NOP10Q9NPE3 64 aaKnown RBP4.08□□□□□ -1.76
ATXN3-230ENST00000554673 M0R2P5 195 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 IGHV3-53P01767 116 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 DAZ2Q13117 558 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms