RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 DNAH2Q9P225 4427 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 PRAC2D3DTV9 90 aa8.33□□□□□ -1.08
VPS33B-204ENST00000554660 M0R381 172 aa8.33□□□□□ -1.08
VPS33B-204ENST00000554660 HLA-DMBP28068 263 aa8.33□□□□□ -1.08
VPS33B-204ENST00000554660 ODF3L2Q3SX64 289 aa8.33□□□□□ -1.08
VPS33B-204ENST00000554660 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
VPS33B-204ENST00000554660 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 LEPP41159 167 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 NANOS2P60321 138 aaKnown RBP8.32□□□□□ -1.08
VPS33B-204ENST00000554660 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
VPS33B-204ENST00000554660 ERCC8Q13216 396 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 ODF1Q14990 250 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 TAL2Q16559 108 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 NRACQ8N912 160 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 SPAG8Q99932 426 aaPredicted RBP8.32□□□□□ -1.08
VPS33B-204ENST00000554660 C20orf78Q9BR46 151 aa8.32□□□□□ -1.08
VPS33B-204ENST00000554660 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 C9orf118A6NHY6 69 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 H0Y8G0 127 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 SOCS3O14543 225 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 DPM2O94777 84 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 CDKN1BP46527 198 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 LAGE3Q14657 143 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 GTF2H5Q6ZYL4 71 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 KIR2DL5BQ8NHK3 375 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 C16orf92Q96LL3 132 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
VPS33B-204ENST00000554660 CBY3A6NI87 242 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 K7EMT4 169 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 NXPH4O95158 308 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 IGKCP01834 107 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 PLNP26678 52 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 RNF182Q8N6D2 247 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 POM121L12Q8N7R1 296 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 MAP6D1Q9H9H5 199 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 C11orf21Q9P2W6 132 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 UFC1Q9Y3C8 167 aa8.3□□□□□ -1.08
VPS33B-204ENST00000554660 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 IGFL4Q6B9Z1 124 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 ODF3Q96PU9 254 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
VPS33B-204ENST00000554660 TIMM8BQ9Y5J9 83 aaPredicted RBP8.29□□□□□ -1.08
VPS33B-204ENST00000554660 DNAH11Q96DT5 4516 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 IGHV3OR16-8A0A075B7F1 116 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 A0A087WX48 190 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 DEFB4AO15263 64 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 SMIM17P0DL12 118 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 ASIPP42127 132 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 SPANXN1Q5VSR9 72 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 UFSP1Q6NVU6 142 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 AP1S3Q96PC3 154 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
VPS33B-204ENST00000554660 ZNF207O43670 478 aaKnown RBP8.27□□□□□ -1.09
VPS33B-204ENST00000554660 PRSS1P07477 247 aa8.27□□□□□ -1.09
VPS33B-204ENST00000554660 RBX1P62877 108 aa8.27□□□□□ -1.09
VPS33B-204ENST00000554660 C11orf68Q9H3H3 251 aaKnown RBP8.27□□□□□ -1.09
VPS33B-204ENST00000554660 DAZ1Q9NQZ3 744 aaKnown RBP8.27□□□□□ -1.09
VPS33B-204ENST00000554660 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.09
VPS33B-204ENST00000554660 K7EP34 96 aa8.26□□□□□ -1.09
VPS33B-204ENST00000554660 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
VPS33B-204ENST00000554660 OR11H2Q8NH07 326 aa8.26□□□□□ -1.09
VPS33B-204ENST00000554660 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
VPS33B-204ENST00000554660 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
VPS33B-204ENST00000554660 TP73-AS1Q9UF72 201 aa8.26□□□□□ -1.09
VPS33B-204ENST00000554660 TRAV8-6A0A0B4J262 113 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 GAGE10A6NGK3 116 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 IGLL5B9A064 214 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 F8VRH5 84 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.25□□□□□ -1.09
VPS33B-204ENST00000554660 H7C1H1 209 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 K7ERU9 68 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 ID1P41134 155 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
VPS33B-204ENST00000554660 Q6ZVH6 145 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
VPS33B-204ENST00000554660 TOMM6Q96B49 74 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 CSTL1Q9H114 145 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 CST9LQ9H4G1 147 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
VPS33B-204ENST00000554660 IGKV3-7A0A075B6H7 116 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 KLLNB2CW77 178 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 H3BVH4 76 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 SMIM13P0DJ93 91 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 NMUP48645 174 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 PAPPA-AS1Q5QFB9 102 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 C20orf173Q96LM9 149 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 CHAC1Q9BUX1 264 aa8.24□□□□□ -1.09
VPS33B-204ENST00000554660 PKD1P98161 4303 aa8.23□□□□□ -1.09
VPS33B-204ENST00000554660 IGHV3-49A0A0A0MS15 119 aa8.23□□□□□ -1.09
VPS33B-204ENST00000554660 IGHV3-66A0A0C4DH42 116 aa8.23□□□□□ -1.09
VPS33B-204ENST00000554660 GAGE12BA1L429 117 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms