RNA–Protein interactions for RNA: ENST00000554652.5

RALGAPA1-209, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 2

Gene RALGAPA1, Length 4,487 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-209	ENST00000554652	SCGB3A1	Q96QR1	104 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CHCHD7	Q9BUK0	85 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SSBP4	Q9BWG4	385 aa	Predicted RBP	3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CNFN	Q9BYD5	112 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	NACA	E9PAV3	2078 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	RBMY1B	A6NDE4	496 aa	Known RBP	3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	RBMY1E	A6NEQ0	496 aa	Known RBP	3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	NXPH4	O95158	308 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	LEPROTL1	O95214	131 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	APOM	O95445	188 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	RBMY1D	P0C7P1	496 aa	Known RBP	3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	VPREB1	P12018	145 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	HINT1	P49773	126 aa	Predicted RBP	3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	MEIG1	Q5JSS6	88 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CSDC2	Q9Y534	153 aa	Known RBP	3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	C3orf84	H3BNL1	204 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652		K7EIL1	84 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TOMM7	Q9P0U1	55 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	DCHS1	Q96JQ0	3298 aa		3.77	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TRBV25-1	A0A075B6N4	114 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	FAM222A	Q5U5X8	452 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	C14orf178	Q8N769	122 aa	Predicted RBP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	NUP35	Q8NFH5	326 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	LINC00479	Q96M42	142 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	WWC2-AS2	Q96NR7	200 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	EDA2R	Q9HAV5	297 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	KALRN	O60229	2985 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GAGE12J	A6NER3	117 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CCL25	O15444	150 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652		P0DMU3	169 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	FAM231A	P0DMU4	169 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	FAM231C	P0DMU5	169 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GAGE4	Q13068	117 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GAGE5	Q13069	117 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GAGE13	Q4V321	117 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GDF5OS	Q5U4N7	250 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	COX11	Q9Y6N1	276 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GAGE6	Q13070	117 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SS18	Q15532	418 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	FAM104B	Q5XKR9	115 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	NEGR1	Q7Z3B1	354 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	C1orf158	Q8N1D5	194 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	DKK2	Q9UBU2	259 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	MYO15A	Q9UKN7	3530 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	DEFB131B	A0A096LNP1	70 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	IGLV2-8	P01709	118 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GZMB	P10144	247 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	PRB4	P10163	310 aa	Predicted RBP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	IQCJ	Q1A5X6	159 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	KIAA1644	Q3SXP7	199 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	MRPL52	Q86TS9	123 aa	Known RBP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GATD1	Q8NB37	220 aa		3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CHCHD1	Q96BP2	118 aa	Known RBP	3.76	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	MGAM2	Q2M2H8	2515 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652		A0A087WWL8	130 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652		I3L3M4	83 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	LGALS3	P17931	250 aa	Known RBP	3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	KRTAP10-11	P60412	298 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TMEM170B	Q5T4T1	132 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GTSF1L	Q9H1H1	148 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CST9L	Q9H4G1	147 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SCRT2	Q9NQ03	307 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	ATR	Q13535	2644 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	IGHV1-24	A0A0C4DH33	117 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652		B5MCH6	92 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	MRPL16	Q9NX20	251 aa	Known RBP	3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	HHLA3	Q9XRX5	114 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SETX	Q7Z333	2677 aa	Known RBP	3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	ASH1L	Q9NR48	2969 aa	Known RBP	3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CRX	O43186	299 aa	Predicted RBP	3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	UBE2V1	Q13404	147 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	ZNRF2	Q8NHG8	242 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	VAMP8	Q9BV40	100 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SNHG12	Q9BXW3	62 aa		3.75	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TENM4	Q6N022	2769 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	IGKV3D-20	A0A0C4DH25	116 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	NFE4	Q86UQ8	179 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	AMN1	Q8IY45	258 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TM2D2	Q9BX73	214 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CENPE	Q02224	2701 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652		A0A0J9YY99	117 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	IGLL5	B9A064	214 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	CBLN2	Q8IUK8	224 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	ATP6V0E2	Q8NHE4	81 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TMEM243	Q9BU79	118 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	ATM	Q13315	3056 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TRBV7-3	A0A075B6L6	115 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	TRBV6-5	A0A0K0K1A5	114 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	GNRH2	O43555	120 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	LYRM7	Q5U5X0	104 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	ANAPC13	Q9BS18	74 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	WFDC10A	Q9H1F0	79 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	MRPS16	Q9Y3D3	137 aa	Known RBP	3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	FREM2	Q5SZK8	3169 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	PDZD2	O15018	2839 aa		3.74	□□□□□ -1.81
RALGAPA1-209	ENST00000554652	SRSF3	P84103	164 aa	Known RBP	3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms