RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GVQW1Q8N7I0 195 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 UBE2WQ96B02 151 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 DCTN5Q9BTE1 182 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 DEPPQ9NTK1 212 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 CALYQ9NYX4 217 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 MPDZO75970 2070 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 HEATR5BQ9P2D3 2071 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 ARHGAP21Q5T5U3 1957 aa3.3□□□□□ -1.88
ATXN3-227ENST00000554491 RAI1Q7Z5J4 1906 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-227ENST00000554491 IGLV3-32A0A0A0MS00 114 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 TMEM14DPA8MWL7 114 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 H3BVH4 76 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 BCE1O60756 84 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 NGFP01138 241 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 HBDP02042 147 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 SYNJ2BPP57105 145 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 SNRPD3P62318 126 aaKnown RBP3.29□□□□□ -1.88
ATXN3-227ENST00000554491 FAM104BQ5XKR9 115 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 ZFP2Q6ZN57 461 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 SDIM1Q6ZPB5 146 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 LYZL2Q7Z4W2 148 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 ODF3L1Q8IXM7 274 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 RPRMLQ8N4K4 120 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF525Q8N782 197 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 OR8A1Q8NGG7 326 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 TAF15Q92804 592 aaKnown RBP eCLIP3.29□□□□□ -1.88
ATXN3-227ENST00000554491 C17orf77Q96MU5 243 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 DYNLRB1Q9NP97 96 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 SLC25A15Q9Y619 301 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 TRRAPQ9Y4A5 3859 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 DSCAMO60469 2012 aa3.29□□□□□ -1.88
ATXN3-227ENST00000554491 NINQ8N4C6 2090 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 IGLV3-12A0A075B6K2 115 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 A0A1B0GXF2 115 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 WI2-2373I1.2A0A1W2PRP0 233 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 UBE2L6O14933 153 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 ZNHIT1O43257 154 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 FRMD6-AS1P0C7T7 363 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 SLC25A16P16260 332 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 UBE2D1P51668 147 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 LAGE3Q14657 143 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 ABCA11PQ4W5N1 156 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 CENPWQ5EE01 88 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 C9orf139Q6ZV77 190 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 TMEM243Q9BU79 118 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 TTTY10Q9BZA0 68 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 TAS2R4Q9NYW5 299 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF492Q9P255 531 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
ATXN3-227ENST00000554491 HEATR5AQ86XA9 2040 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 SCN2AQ99250 2005 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 TMSB15BA0A087X1C1 80 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 IGHV4-28A0A0C4DH34 117 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 LINC01549A6NIU2 74 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 J3QT63 122 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 CCL24O00175 119 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 PEX7O00628 323 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 HBBP68871 147 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 ATXN8Q156A1 80 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 DEFB110Q30KQ9 67 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 COX8CQ7Z4L0 72 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 SMIM29Q86T20 159 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 NDUFA11Q86Y39 141 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 ZNF414Q96IQ9 312 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 C11orf68Q9H3H3 251 aaKnown RBP3.27□□□□□ -1.89
ATXN3-227ENST00000554491 MOB4Q9Y3A3 225 aa3.27□□□□□ -1.89
ATXN3-227ENST00000554491 TENM1Q9UKZ4 2725 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
ATXN3-227ENST00000554491 EML6Q6ZMW3 1958 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 TRAV41A0A0B4J266 112 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 NDUFC1O43677 76 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 TIMM17BO60830 172 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 IGLV3-1P01715 115 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 CCKP06307 115 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 MFAP2P55001 183 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 NNATQ16517 81 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 MIC13Q5XKP0 118 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 UNQ9165/PRO28630Q6UXU0 137 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 FOXL2NBQ6ZUU3 175 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 LINC00596Q86U02 117 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 DCANP1Q8TF63 244 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 PGLYRP4Q96LB8 373 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 CYSTM1Q9H1C7 97 aa3.26□□□□□ -1.89
ATXN3-227ENST00000554491 FREM1Q5H8C1 2179 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 A0A1W2PPR1 153 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 M0R378 163 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 SPINK4O60575 86 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 LTAP01374 205 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 IGKV1D-33P01593 117 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 IGKV1-33P01594 117 aa3.25□□□□□ -1.89
ATXN3-227ENST00000554491 RNASE2P10153 161 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms