RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 MAP1LC3CQ9BXW4 147 aa6.66□□□□□ -1.34
LINC00520-202ENST00000554196 IGHV3OR16-12A0A075B7B8 117 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 RS1O15537 224 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 IGLL1P15814 213 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 GATA1P15976 413 aaPredicted RBP6.65□□□□□ -1.34
LINC00520-202ENST00000554196 PET117Q6UWS5 81 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 TEX43Q6ZNM6 134 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 C1orf43Q9BWL3 253 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 JPT2Q9H910 190 aa6.65□□□□□ -1.34
LINC00520-202ENST00000554196 A0A096LNJ9 63 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 M0QY20 66 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 ATP5LO75964 103 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 GAS8-AS1O95177 125 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 SPATA3Q8NHX4 192 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 RPL39LQ96EH5 51 aaKnown RBP6.64□□□□□ -1.35
LINC00520-202ENST00000554196 DNAJC30Q96LL9 226 aa6.64□□□□□ -1.35
LINC00520-202ENST00000554196 MRPL16Q9NX20 251 aaKnown RBP6.64□□□□□ -1.35
LINC00520-202ENST00000554196 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 TRBV27A0A0K0K1C4 114 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 TSTD3H0UI37 97 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 VCYO14598 125 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 IGHV3-53P01767 116 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 VWFP04275 2813 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 AZU1P20160 251 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 RHOHQ15669 191 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 CFAP126Q5VTH2 177 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 UFSP1Q6NVU6 142 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 OVOL2Q9BRP0 275 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 STAB1Q9NY15 2570 aa6.63□□□□□ -1.35
LINC00520-202ENST00000554196 SDHAF1A6NFY7 115 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 NUDT3O95989 172 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 POLR2KP53803 58 aaKnown RBP6.62□□□□□ -1.35
LINC00520-202ENST00000554196 PKIAP61925 76 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 EGFEM1PQ0D2K5 195 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 Q8N976 141 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 OR4C5Q8NGB2 326 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 IFI27L1Q96BM0 104 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 VAMP8Q9BV40 100 aa6.62□□□□□ -1.35
LINC00520-202ENST00000554196 TRBV10-1A0A0K0K1A3 114 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 A8MZ25 164 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 RIPPLY3P57055 190 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 LINC01545Q5VT33 79 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 LGALS9CQ6DKI2 356 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 CYSLTR1Q9Y271 337 aa6.61□□□□□ -1.35
LINC00520-202ENST00000554196 H3BS24 57 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 I3L3M4 83 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 Q6ZTI0 123 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 LINC00173Q6ZV60 143 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 C18orf15Q96N68 181 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 NOP10Q9NPE3 64 aaKnown RBP6.6□□□□□ -1.35
LINC00520-202ENST00000554196 TNFRSF18Q9Y5U5 241 aa6.6□□□□□ -1.35
LINC00520-202ENST00000554196 TRGV2A0A075B6R0 118 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 LYRM9A8MSI8 78 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 HSBP1L1C9JCN9 74 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 K7EQD1 137 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 MIFP14174 115 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 LINC00612Q8N6U2 182 aa6.59□□□□□ -1.35
LINC00520-202ENST00000554196 TRAV9-2A0A087WT02 112 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 IGHV3-73A0A0B4J1V6 119 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
LINC00520-202ENST00000554196 PRM2P04554 102 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 IGHV4-30-4P0DP06 118 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 RPL36AP83881 106 aaKnown RBP6.58□□□□□ -1.36
LINC00520-202ENST00000554196 Q6ZN92 141 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 NEXN-AS1Q8NBZ9 246 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 RPL36ALQ969Q0 106 aaKnown RBP6.58□□□□□ -1.36
LINC00520-202ENST00000554196 TIMM17AQ99595 171 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 TP53TG1Q9Y2A0 90 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 COL6A5A8TX70 2615 aa6.58□□□□□ -1.36
LINC00520-202ENST00000554196 GAGE12BA1L429 117 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 GAGE7O76087 117 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 NPSP0C0P6 89 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 DEFB135Q30KP9 77 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 SPATA45Q537H7 98 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 ERASQ7Z444 233 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 RNF183Q96D59 192 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 TMEM141Q96I45 108 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
LINC00520-202ENST00000554196 TRBV7-3A0A075B6L6 115 aa6.56□□□□□ -1.36
LINC00520-202ENST00000554196 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
LINC00520-202ENST00000554196 PCP4L1A6NKN8 68 aa6.56□□□□□ -1.36
LINC00520-202ENST00000554196 H0Y8G0 127 aa6.56□□□□□ -1.36
LINC00520-202ENST00000554196 TSHBP01222 138 aa6.56□□□□□ -1.36
LINC00520-202ENST00000554196 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
LINC00520-202ENST00000554196 COTL1Q14019 142 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms