RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ATP5G1P05496 136 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 NHLRC4P0CG21 123 aaPredicted RBP5.42□□□□□ -1.54
TDP1-209ENST00000554180 ESDP10768 282 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 PMCHP20382 165 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 CHCHD1Q96BP2 118 aaKnown RBP5.42□□□□□ -1.54
TDP1-209ENST00000554180 DNAJC30Q96LL9 226 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 ST20Q9HBF5 79 aa5.42□□□□□ -1.54
TDP1-209ENST00000554180 TRGV4A0A0C4DH28 118 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 A0A0J9YWU9 116 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 TRBV27A0A0K0K1C4 114 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 SDHAF1A6NFY7 115 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 LINC01546A6NGU7 62 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 C5orf52A6NGY3 159 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 TCAPO15273 167 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 SERF1AO75920 110 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 POLR2KP53803 58 aaKnown RBP5.41□□□□□ -1.54
TDP1-209ENST00000554180 NDUFA6P56556 154 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 DEFA6Q01524 100 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 FHL2Q14192 279 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 RHOHQ15669 191 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 IQCJQ1A5X6 159 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 Q6ZSN1 163 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 Q8N8P6 123 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 PRSS3P2Q8NHM4 247 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 RPL39LQ96EH5 51 aaKnown RBP5.41□□□□□ -1.54
TDP1-209ENST00000554180 PRADC1Q9BSG0 188 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 TMEM70Q9BUB7 260 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 SMIM2Q9BVW6 85 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 AP5S1Q9NUS5 200 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 PRO0255Q9UI72 69 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 NACAE9PAV3 2078 aa5.41□□□□□ -1.54
TDP1-209ENST00000554180 IGLV2-18A0A075B6J9 118 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 LINC00614P0C842 121 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 HOXA5P20719 270 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 LINC00310P59036 64 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 RPL36AP83881 106 aaKnown RBP5.4□□□□□ -1.54
TDP1-209ENST00000554180 FA2HQ7L5A8 372 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 NIT1Q86X76 327 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 SLC25A29Q8N8R3 303 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 NEXN-AS1Q8NBZ9 246 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 C11orf45Q8TAV5 145 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 RPL36ALQ969Q0 106 aaKnown RBP5.4□□□□□ -1.54
TDP1-209ENST00000554180 HHLA3Q9XRX5 114 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 TNFRSF18Q9Y5U5 241 aa5.4□□□□□ -1.54
TDP1-209ENST00000554180 FBN3Q75N90 2809 aa5.4□□□□□ -1.55
TDP1-209ENST00000554180 TRBV7-3A0A075B6L6 115 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 VCYO14598 125 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 HSBP1O75506 76 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 LINC00694P0DN24 101 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 IFI27P40305 119 aaPredicted RBP5.39□□□□□ -1.55
TDP1-209ENST00000554180 CRYBA4P53673 196 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 SNRPEP62304 92 aaKnown RBP5.39□□□□□ -1.55
TDP1-209ENST00000554180 C12orf74Q32Q52 190 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 RNASEKQ6P5S7 137 aaKnown RBP5.39□□□□□ -1.55
TDP1-209ENST00000554180 URB1-AS1Q96HZ7 61 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 PACRGQ96M98 296 aaPredicted RBP5.39□□□□□ -1.55
TDP1-209ENST00000554180 KIR2DL4Q99706 377 aa5.39□□□□□ -1.55
TDP1-209ENST00000554180 LINC01549A6NIU2 74 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 H3BNG1 76 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 I3L3M4 83 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 P0DMU3 169 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 FAM231AP0DMU4 169 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 FAM231CP0DMU5 169 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 UBE2D3P61077 147 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 UBE2D2P62837 147 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 LAGE3Q14657 143 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 ORMDL2Q53FV1 153 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 DAZ4Q86SG3 579 aaKnown RBP5.38□□□□□ -1.55
TDP1-209ENST00000554180 HIST3H2BBQ8N257 126 aa5.38□□□□□ -1.55
TDP1-209ENST00000554180 DAZ3Q9NR90 486 aaKnown RBP5.38□□□□□ -1.55
TDP1-209ENST00000554180 TRAV26-1A0A087WT03 109 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 F5H768 121 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 PAX4O43316 350 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 G0S2P27469 103 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 S100A2P29034 98 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 Q6ZTC4 211 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 SH2D6Q7Z4S9 175 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 ZNRF2Q8NHG8 242 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 TMEM18Q96B42 140 aa5.37□□□□□ -1.55
TDP1-209ENST00000554180 PRKDCP78527 4128 aaKnown RBP5.37□□□□□ -1.55
TDP1-209ENST00000554180 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 IGHV1-24A0A0C4DH33 117 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 NUPR1O60356 82 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 HBDP02042 147 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 GYPEP15421 78 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 FCER1GP30273 86 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 AMTP48728 403 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 NANOS2P60321 138 aaKnown RBP5.36□□□□□ -1.55
TDP1-209ENST00000554180 COTL1Q14019 142 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 TMEM97Q5BJF2 176 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 VSIG2Q96IQ7 327 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 HIST1H2BLQ99880 126 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 Q9UF83 564 aa5.36□□□□□ -1.55
TDP1-209ENST00000554180 GAGE12JA6NER3 117 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 TSHBP01222 138 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 HTN3P15516 51 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 GAGE1Q13065 139 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 GAGE4Q13068 117 aa5.35□□□□□ -1.55
TDP1-209ENST00000554180 GAGE5Q13069 117 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms