RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 JPT2Q9H910 190 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 TRAV4A0A0B4J268 109 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 LINC00315P59091 139 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 CFAP126Q5VTH2 177 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 Q6ZTI0 123 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 BAGE3Q86Y29 109 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 Q8NAQ8 132 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 SAMD10Q9BYL1 202 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 UBR4Q5T4S7 5183 aa10.29□□□□□ -0.76
SHMT2-208ENST00000553868 GAGE12BA1L429 117 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 GAGE7O76087 117 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 GAGE12FP0CL80 117 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 GAGE12GP0CL81 117 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 GAGE12IP0CL82 117 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
SHMT2-208ENST00000553868 C18orf32Q8TCD1 76 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 PKD1P98161 4303 aa10.28□□□□□ -0.76
SHMT2-208ENST00000553868 SMKR1H3BMG3 65 aa10.27□□□□□ -0.77
SHMT2-208ENST00000553868 NCR2O95944 276 aa10.27□□□□□ -0.77
SHMT2-208ENST00000553868 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
SHMT2-208ENST00000553868 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
SHMT2-208ENST00000553868 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.77
SHMT2-208ENST00000553868 C18orf15Q96N68 181 aa10.27□□□□□ -0.77
SHMT2-208ENST00000553868 TRAV26-2A0A0B4J265 109 aa10.26□□□□□ -0.77
SHMT2-208ENST00000553868 TNFRSF6BO95407 300 aa10.26□□□□□ -0.77
SHMT2-208ENST00000553868 FAM222AQ5U5X8 452 aa10.26□□□□□ -0.77
SHMT2-208ENST00000553868 UFSP1Q6NVU6 142 aa10.26□□□□□ -0.77
SHMT2-208ENST00000553868 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
SHMT2-208ENST00000553868 NPYP01303 97 aa10.25□□□□□ -0.77
SHMT2-208ENST00000553868 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
SHMT2-208ENST00000553868 C20orf78Q9BR46 151 aa10.25□□□□□ -0.77
SHMT2-208ENST00000553868 C11orf68Q9H3H3 251 aaKnown RBP10.25□□□□□ -0.77
SHMT2-208ENST00000553868 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
SHMT2-208ENST00000553868 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 M0QY20 66 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 IGHV3-53P01767 116 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 PMCHP20382 165 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 DAD1P61803 113 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 FA2HQ7L5A8 372 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 NRACQ8N912 160 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 ST20Q9HBF5 79 aa10.24□□□□□ -0.77
SHMT2-208ENST00000553868 NXT2Q9NPJ8 142 aaKnown RBP10.24□□□□□ -0.77
SHMT2-208ENST00000553868 TRGV4A0A0C4DH28 118 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 TRBV6-5A0A0K0K1A5 114 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 DEFB4AO15263 64 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 GATA1P15976 413 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-208ENST00000553868 SNRPEP62304 92 aaKnown RBP10.23□□□□□ -0.77
SHMT2-208ENST00000553868 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-208ENST00000553868 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
SHMT2-208ENST00000553868 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
SHMT2-208ENST00000553868 SERF1AO75920 110 aa10.22□□□□□ -0.77
SHMT2-208ENST00000553868 LINC00614P0C842 121 aa10.22□□□□□ -0.77
SHMT2-208ENST00000553868 HOXA5P20719 270 aa10.22□□□□□ -0.77
SHMT2-208ENST00000553868 S100A2P29034 98 aa10.22□□□□□ -0.77
SHMT2-208ENST00000553868 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
SHMT2-208ENST00000553868 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
SHMT2-208ENST00000553868 LGALS9CQ6DKI2 356 aa10.22□□□□□ -0.77
SHMT2-208ENST00000553868 RNASEKQ6P5S7 137 aaKnown RBP10.22□□□□□ -0.77
SHMT2-208ENST00000553868 DNAJC30Q96LL9 226 aa10.22□□□□□ -0.77
SHMT2-208ENST00000553868 TRBV10-1A0A0K0K1A3 114 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 LOC389332A0A1B0GUA5 103 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 HSBP1O75506 76 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 GAS8-AS1O95177 125 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 ESDP10768 282 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 NIT1Q86X76 327 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 Q8N8P6 123 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.77
SHMT2-208ENST00000553868 AP5S1Q9NUS5 200 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
SHMT2-208ENST00000553868 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
SHMT2-208ENST00000553868 K7EMI3 77 aa10.2□□□□□ -0.78
SHMT2-208ENST00000553868 K7EQD1 137 aa10.2□□□□□ -0.78
SHMT2-208ENST00000553868 PRADC1Q9BSG0 188 aa10.2□□□□□ -0.78
SHMT2-208ENST00000553868 SMIM2Q9BVW6 85 aa10.2□□□□□ -0.78
SHMT2-208ENST00000553868 VCYO14598 125 aa10.19□□□□□ -0.78
SHMT2-208ENST00000553868 TCAPO15273 167 aa10.19□□□□□ -0.78
SHMT2-208ENST00000553868 ATP5G1P05496 136 aa10.19□□□□□ -0.78
SHMT2-208ENST00000553868 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-208ENST00000553868 RHOHQ15669 191 aa10.19□□□□□ -0.78
SHMT2-208ENST00000553868 RPL36AP83881 106 aaKnown RBP10.18□□□□□ -0.78
SHMT2-208ENST00000553868 FHL2Q14192 279 aa10.18□□□□□ -0.78
SHMT2-208ENST00000553868 HIST3H2BBQ8N257 126 aa10.18□□□□□ -0.78
SHMT2-208ENST00000553868 RPL36ALQ969Q0 106 aaKnown RBP10.18□□□□□ -0.78
SHMT2-208ENST00000553868 TMEM18Q96B42 140 aa10.18□□□□□ -0.78
SHMT2-208ENST00000553868 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
SHMT2-208ENST00000553868 TMEM70Q9BUB7 260 aa10.18□□□□□ -0.78
SHMT2-208ENST00000553868 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
SHMT2-208ENST00000553868 SDHAF1A6NFY7 115 aa10.17□□□□□ -0.78
SHMT2-208ENST00000553868 Q6ZSN1 163 aa10.17□□□□□ -0.78
SHMT2-208ENST00000553868 SLC25A29Q8N8R3 303 aa10.17□□□□□ -0.78
SHMT2-208ENST00000553868 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms