RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 LOXL1Q08397 574 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF40-202ENST00000553709 C22orf34Q6ZV56 151 aa11.7□□□□□ -0.54
ARHGEF40-202ENST00000553709 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
ARHGEF40-202ENST00000553709 A0A0J9YX75 114 aa11.7□□□□□ -0.54
ARHGEF40-202ENST00000553709 WDR87Q6ZQQ6 2873 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 MDFICQ9P1T7 246 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 TRACP01848 142 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 ACYP1P07311 99 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 WFDC2Q14508 124 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
ARHGEF40-202ENST00000553709 CUL9Q8IWT3 2517 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 PIFOQ8TCI5 191 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 LMO4P61968 165 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 MRAPQ8TCY5 172 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
ARHGEF40-202ENST00000553709 H0YGX0 51 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 MRPL23Q16540 153 aaKnown RBP11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 ATP5G1P05496 136 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 DAND5Q8N907 189 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 LINC01548A6NM66 108 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
ARHGEF40-202ENST00000553709 COX7A2LO14548 114 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 HIST2H2BCQ6DN03 193 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 VSIG2Q96IQ7 327 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 TNCP24821 2201 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 TMEM61Q8N0U2 210 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 CRYGBP07316 175 aa11.66□□□□□ -0.54
ARHGEF40-202ENST00000553709 RS1O15537 224 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 PCNTO95613 3336 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 PRR14LQ5THK1 2151 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 FSTL3O95633 263 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 C1orf43Q9BWL3 253 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 TRAV26-1A0A087WT03 109 aa11.65□□□□□ -0.54
ARHGEF40-202ENST00000553709 TNFRSF13BO14836 293 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-202ENST00000553709 PRORYQ9H606 182 aa11.64□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
ARHGEF40-202ENST00000553709 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
ARHGEF40-202ENST00000553709 HHLA3Q9XRX5 114 aa11.63□□□□□ -0.55
ARHGEF40-202ENST00000553709 NACAE9PAV3 2078 aa11.63□□□□□ -0.55
ARHGEF40-202ENST00000553709 CAMK2N2Q96S95 79 aa11.63□□□□□ -0.55
ARHGEF40-202ENST00000553709 Q9HAA7 133 aa11.63□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGF1P05019 195 aa11.62□□□□□ -0.55
ARHGEF40-202ENST00000553709 MYCNOSP40205 109 aa11.62□□□□□ -0.55
ARHGEF40-202ENST00000553709 FOXI1Q12951 378 aa11.62□□□□□ -0.55
ARHGEF40-202ENST00000553709 CSPG4Q6UVK1 2322 aa11.61□□□□□ -0.55
ARHGEF40-202ENST00000553709 NOTCH2Q04721 2471 aa11.61□□□□□ -0.55
ARHGEF40-202ENST00000553709 LY6LH3BQJ8 138 aa11.61□□□□□ -0.55
ARHGEF40-202ENST00000553709 ESM1Q9NQ30 184 aa11.61□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
ARHGEF40-202ENST00000553709 TMEM263Q8WUH6 116 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-202ENST00000553709 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
ARHGEF40-202ENST00000553709 EBI3Q14213 229 aa11.6□□□□□ -0.55
ARHGEF40-202ENST00000553709 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
ARHGEF40-202ENST00000553709 TRBV10-2A0A0K0K1G8 114 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 LGALS9O00182 355 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGHV3-30P01768 117 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGHV3-30-5P0DP03 117 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 ODF3Q96PU9 254 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 TRBV10-1A0A0K0K1A3 114 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 DEFB105AQ8NG35 78 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 CACNA1AO00555 2505 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 NDUFA11Q86Y39 141 aa11.59□□□□□ -0.55
ARHGEF40-202ENST00000553709 CEMP1Q6PRD7 247 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 A0A0B4J2C4 111 aa11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 hADV29S1A0JD25 119 aa11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 CLEC2BQ92478 149 aa11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 CRIP1P50238 77 aa11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
ARHGEF40-202ENST00000553709 H3BT86 120 aa11.57□□□□□ -0.56
ARHGEF40-202ENST00000553709 C19orf84I3L1E1 186 aa11.57□□□□□ -0.56
ARHGEF40-202ENST00000553709 UBE2BP63146 152 aa11.57□□□□□ -0.56
ARHGEF40-202ENST00000553709 Q6ZUT4 128 aa11.57□□□□□ -0.56
ARHGEF40-202ENST00000553709 RPL18AQ02543 176 aaKnown RBP11.57□□□□□ -0.56
ARHGEF40-202ENST00000553709 G3V4G9 280 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 C20orf173Q96LM9 149 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 PIEZO1Q92508 2521 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 CHD7Q9P2D1 2997 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 CXCL5P42830 114 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 EXPH5Q8NEV8 1989 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 ETDCA0A1B0GVM5 59 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 K7EQG2 157 aa11.56□□□□□ -0.56
ARHGEF40-202ENST00000553709 NEXN-AS1Q8NBZ9 246 aa11.55□□□□□ -0.56
ARHGEF40-202ENST00000553709 CLPSL1A2RUU4 121 aa11.55□□□□□ -0.56
ARHGEF40-202ENST00000553709 LECT2O14960 151 aa11.55□□□□□ -0.56
ARHGEF40-202ENST00000553709 P0DMU3 169 aa11.55□□□□□ -0.56
ARHGEF40-202ENST00000553709 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
ARHGEF40-202ENST00000553709 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms