RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MED31Q9Y3C7 131 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 IER3IP1Q9Y5U9 82 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 KIAA2026Q5HYC2 2103 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
SCFD1-210ENST00000553693 SORL1Q92673 2214 aa1.46□□□□□ -2.18
SCFD1-210ENST00000553693 DNAH6Q9C0G6 4158 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 FUOMA2VDF0 154 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 MEIS3P1A6NDR6 274 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 TMEM238C9JI98 176 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 G3V318 75 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 BUB1B-PAK6H3BSN5 160 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 ZNF737O75373 536 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 IGLV1-51P01701 117 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 RBP4P02753 201 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 FABP1P07148 127 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 HTR1AP08908 422 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 UBBP0CG47 229 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 IDO1P14902 403 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 EDDM3BP56851 147 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 FXYD6P3P58550 94 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 RUNX1Q01196 453 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 DIAPH2-AS1Q14236 149 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 HES1Q14469 280 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 OR5A1Q8NGJ0 315 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 OR8D4Q8NGM9 314 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 ZNF714Q96N38 554 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 OR4C12Q96R67 309 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 HIST1H2BLQ99880 126 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 HSPB9Q9BQS6 159 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 TXNDC17Q9BRA2 123 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 RTL8AQ9BWD3 113 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 WFDC10AQ9H1F0 79 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 BIN3Q9NQY0 253 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 LYRM2Q9NU23 88 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-210ENST00000553693 RASL12Q9NYN1 266 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 MPC1Q9Y5U8 109 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 HMCN2Q8NDA2 5059 aa1.45□□□□□ -2.18
SCFD1-210ENST00000553693 SRRM2Q9UQ35 2752 aaKnown RBP1.44□□□□□ -2.18
SCFD1-210ENST00000553693 LRP1BQ9NZR2 4599 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 DMBT1Q9UGM3 2413 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-210ENST00000553693 TRBV19A0A075B6N1 114 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 A0A1B0GV72 72 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 RIIAD1A6NNX1 92 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 OOSP1A8MZH6 123 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 ZNF736B4DX44 427 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-210ENST00000553693 M0R2N4 97 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 IGKV1-5P01602 117 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 PMP2P02689 132 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 GPX1P07203 203 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 P0DMU3 169 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 FAM231AP0DMU4 169 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 FAM231CP0DMU5 169 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 DEFA4P12838 97 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 SPI1P17947 270 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 PIGPP57054 158 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 GNG3P63215 75 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 GNG5P63218 68 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 SUPT4H1P63272 117 aaKnown RBP1.44□□□□□ -2.18
SCFD1-210ENST00000553693 SNCBQ16143 134 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 SMIM21Q3B7S5 101 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 HAGHLQ6PII5 290 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-210ENST00000553693 LYG2Q86SG7 212 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 ANGPTL5Q86XS5 388 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 Q8N6K4 173 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 LEAP2Q969E1 77 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 SLAMF6Q96DU3 332 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 YPEL2Q96QA6 119 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 LINC00312Q9Y6C7 94 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 MYCBP2O75592 4640 aa1.44□□□□□ -2.18
SCFD1-210ENST00000553693 DNAH5Q8TE73 4624 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 TRGV10A0A0A0MS01 117 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 A0A1B0GVG6 124 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 DUXBA0A1W2PPF3 345 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 PPP5D1E7EU14 171 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 F8W036 122 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 GGCTO75223 188 aaKnown RBP1.43□□□□□ -2.18
SCFD1-210ENST00000553693 OR4E1P0C645 316 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 NFYBP25208 207 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 ZNF80P51504 273 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-210ENST00000553693 CDC42P60953 191 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 SPANXN5Q5MJ07 72 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 HEPN1Q6WQI6 88 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 LCA10Q71F78 164 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 FAM24BQ8N5W8 94 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 OR5A2Q8NGI9 324 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 TERB2Q8NHR7 220 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 DCANP1Q8TF63 244 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 DYDC1Q8WWB3 177 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 LZICQ8WZA0 190 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 GPX7Q96SL4 187 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-210ENST00000553693 AMELYQ99218 206 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 GINS3Q9BRX5 216 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 CCDC167Q9P0B6 97 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 LAMTOR3Q9UHA4 124 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 PRNDQ9UKY0 176 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 APLNQ9ULZ1 77 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 BAIAP2Q9UQB8 552 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 UFC1Q9Y3C8 167 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 FAT1Q14517 4588 aa1.43□□□□□ -2.18
SCFD1-210ENST00000553693 TNCP24821 2201 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms