RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TIAM1Q13009 1591 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 USP54Q70EL1 1684 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 TRPM7Q96QT4 1865 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 EML5Q05BV3 1969 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 NINQ8N4C6 2090 aa2.18□□□□□ -2.06
TDP1-207ENST00000553617 SEC16AO15027 2179 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 SDK2Q58EX2 2172 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 MALRD1Q5VYJ5 2156 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 ABCA6Q8N139 1617 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 TNS1Q9HBL0 1735 aaKnown RBP2.17□□□□□ -2.06
TDP1-207ENST00000553617 TRPM3Q9HCF6 1732 aaPredicted RBP2.17□□□□□ -2.06
TDP1-207ENST00000553617 IGKV1D-42A0A075B6H8 117 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 IGHV1-18A0A0C4DH31 117 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 A0A0G2JND7 137 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 HCG22E2RYF7 251 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 H7BZZ5 65 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 BCE1O60756 84 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 IGHV3-53P01767 116 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 DSCR4P56555 118 aaPredicted RBP2.17□□□□□ -2.06
TDP1-207ENST00000553617 KRTAP13-2Q52LG2 175 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 Q6ZS52 159 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 SMIM5Q71RC9 77 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 SCRT1Q9BWW7 348 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 MANBALQ9NQG1 85 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 CROCC2H7BZ55 1655 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 RGPD8O14715 1765 aaPredicted RBP2.17□□□□□ -2.06
TDP1-207ENST00000553617 RGPD2P0DJD1 1756 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 KDM3BQ7LBC6 1761 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 RGPD5Q99666 1765 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 TANC1Q9C0D5 1861 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 PLXNA1Q9UIW2 1896 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 RAPGEF6Q8TEU7 1601 aa2.17□□□□□ -2.06
TDP1-207ENST00000553617 ARFGEF2Q9Y6D5 1785 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 CLTCQ00610 1675 aaKnown RBP2.16□□□□□ -2.06
TDP1-207ENST00000553617 ATP7BP35670 1465 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 IGLV2-18A0A075B6J9 118 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 TRBV10-3A0A0K0K1G6 114 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 E7EUB6 86 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 ZNF56Q15929 161 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 TIMM21Q9BVV7 248 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.16□□□□□ -2.06
TDP1-207ENST00000553617 BIVM-ERCC5R4GMW8 1640 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 KCPQ6ZWJ8 1503 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 LRRC7Q96NW7 1537 aa2.16□□□□□ -2.06
TDP1-207ENST00000553617 UNC13BO14795 1591 aa2.15□□□□□ -2.06
TDP1-207ENST00000553617 DIP2AQ14689 1571 aa2.15□□□□□ -2.06
TDP1-207ENST00000553617 SHANK1Q9Y566 2161 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 RGPD1P0DJD0 1748 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 TRBV7-1A0A0A6YYK4 115 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 MIR22HGQ0VDD5 57 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 LY6EQ16553 131 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 SPANXN5Q5MJ07 72 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 XAF1Q6GPH4 301 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 ZCCHC23Q6ZST2 131 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 ZNF826PQ6ZT77 177 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 C20orf166-AS1Q96NR2 134 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 MINOS1-NBL1R4GNA1 71 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 LTBP4Q8N2S1 1624 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 MYO3AQ8NEV4 1616 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 RNF17Q9BXT8 1623 aaKnown RBP2.15□□□□□ -2.07
TDP1-207ENST00000553617 SYCP2Q9BX26 1530 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 MED13Q9UHV7 2174 aa2.15□□□□□ -2.07
TDP1-207ENST00000553617 BTAF1O14981 1849 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 DOCK11Q5JSL3 2073 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 C1orf167Q5SNV9 1468 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 MGAMO43451 1857 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 IGLV10-54A0A075B6I4 117 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 A0A087WSZ3 146 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 BAALC-AS2P0C853 105 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 COX8AP10176 69 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 KLKP1Q107X0 134 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 VMO1Q7Z5L0 202 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 FAM223AQ8IWN6 122 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 TMEM254Q8TBM7 123 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 PRO1854Q9UHT4 67 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 ITSN1Q15811 1721 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 WDR90Q96KV7 1748 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 PTPRMP28827 1452 aa2.14□□□□□ -2.07
TDP1-207ENST00000553617 BAZ2BQ9UIF8 2168 aaKnown RBP2.13□□□□□ -2.07
TDP1-207ENST00000553617 STRCP1A6NGW2 1772 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 CUL9Q8IWT3 2517 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 SHROOM3Q8TF72 1996 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 TRAV10A0A0B4J240 114 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 ERC2-IT1O76042 136 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 TFF1P04155 84 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 UBE2D3P61077 147 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 UBE2D2P62837 147 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 PSMG4Q5JS54 123 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 C6orf201Q7Z4U5 140 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 Q8N6K4 173 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 TVP23CQ96ET8 276 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 FAM167A-AS1Q96KT0 104 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 BPESC1Q9GZL8 116 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 DYNLRB1Q9NP97 96 aa2.13□□□□□ -2.07
TDP1-207ENST00000553617 MROH2BQ7Z745 1585 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms