RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CRIP1P50238 77 aa8.38□□□□□ -1.07
PRPF39-204ENST00000553605 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
PRPF39-204ENST00000553605 SCGB1C1Q8TD33 95 aa8.38□□□□□ -1.07
PRPF39-204ENST00000553605 ARL2-SNX15V9GYD0 113 aa8.38□□□□□ -1.07
PRPF39-204ENST00000553605 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
PRPF39-204ENST00000553605 ARL14EPLP0DKL9 152 aa8.37□□□□□ -1.07
PRPF39-204ENST00000553605 RAB2AP61019 212 aa8.37□□□□□ -1.07
PRPF39-204ENST00000553605 AQP10Q96PS8 301 aa8.37□□□□□ -1.07
PRPF39-204ENST00000553605 RBM38Q9H0Z9 239 aaKnown RBP8.37□□□□□ -1.07
PRPF39-204ENST00000553605 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
PRPF39-204ENST00000553605 TRAV6A0A075B6T7 132 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 TMSB15BA0A087X1C1 80 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 GVQW2A0A096LPI5 108 aaPredicted RBP8.35□□□□□ -1.07
PRPF39-204ENST00000553605 F5H697 171 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 NOL3O60936 208 aaKnown RBP8.35□□□□□ -1.07
PRPF39-204ENST00000553605 MT-ND6P03923 174 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 SULT1A2P50226 295 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 FER1L6-AS1Q8NA97 138 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 SUN5Q8TC36 379 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 DIRC1Q969H9 104 aa8.35□□□□□ -1.07
PRPF39-204ENST00000553605 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
PRPF39-204ENST00000553605 SH2D1AO60880 128 aa8.34□□□□□ -1.07
PRPF39-204ENST00000553605 C1orf137Q5JT78 98 aa8.34□□□□□ -1.07
PRPF39-204ENST00000553605 H0YIZ8 118 aa8.33□□□□□ -1.08
PRPF39-204ENST00000553605 STAG3L2P0CL84 134 aa8.33□□□□□ -1.08
PRPF39-204ENST00000553605 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
PRPF39-204ENST00000553605 GCHFRP30047 84 aa8.33□□□□□ -1.08
PRPF39-204ENST00000553605 LRRC37A5PQ49AS3 106 aa8.33□□□□□ -1.08
PRPF39-204ENST00000553605 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
PRPF39-204ENST00000553605 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
PRPF39-204ENST00000553605 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
PRPF39-204ENST00000553605 SMIM3Q9BZL3 60 aa8.32□□□□□ -1.08
PRPF39-204ENST00000553605 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
PRPF39-204ENST00000553605 CDC34P49427 236 aaPredicted RBP8.31□□□□□ -1.08
PRPF39-204ENST00000553605 Q86TA4 180 aa8.31□□□□□ -1.08
PRPF39-204ENST00000553605 SDHCQ99643 169 aaPredicted RBP8.31□□□□□ -1.08
PRPF39-204ENST00000553605 NUDT15Q9NV35 164 aa8.31□□□□□ -1.08
PRPF39-204ENST00000553605 TRAV1-1A0A0B4J248 108 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 A6NHS1 94 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 RPL12P30050 165 aaKnown RBP8.3□□□□□ -1.08
PRPF39-204ENST00000553605 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 OR10AG1Q8NH19 301 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 ZNF471Q9BX82 626 aaPredicted RBP8.3□□□□□ -1.08
PRPF39-204ENST00000553605 HSPB11Q9Y547 144 aa8.3□□□□□ -1.08
PRPF39-204ENST00000553605 H0Y9J4 135 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 UBE2L6O14933 153 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 PLA2G10O15496 165 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 SIX6O95475 246 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 IL7P13232 177 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 AMTP48728 403 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 ZNF674Q2M3X9 581 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 CHCHD10Q8WYQ3 142 aaPredicted RBP8.29□□□□□ -1.08
PRPF39-204ENST00000553605 RAB24Q969Q5 203 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 LINC00526Q96FQ7 95 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 TMEM167BQ9NRX6 74 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 ZFP30Q9Y2G7 519 aa8.29□□□□□ -1.08
PRPF39-204ENST00000553605 UBE2D1P51668 147 aa8.28□□□□□ -1.08
PRPF39-204ENST00000553605 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
PRPF39-204ENST00000553605 A0A1W2PRE2 83 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 PEX7O00628 323 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 LYRM1O43325 122 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 KRTAP1-4P0C5Y4 121 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 H2AFB2P0C5Z0 115 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 WFDC1Q9HC57 220 aa8.27□□□□□ -1.09
PRPF39-204ENST00000553605 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
PRPF39-204ENST00000553605 CXorf1O96002 111 aa8.26□□□□□ -1.09
PRPF39-204ENST00000553605 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
PRPF39-204ENST00000553605 SSTP61278 116 aa8.26□□□□□ -1.09
PRPF39-204ENST00000553605 CYCSP99999 105 aaKnown RBP8.26□□□□□ -1.09
PRPF39-204ENST00000553605 SPANXN1Q5VSR9 72 aa8.26□□□□□ -1.09
PRPF39-204ENST00000553605 M0QY20 66 aa8.25□□□□□ -1.09
PRPF39-204ENST00000553605 TSPAN13O95857 204 aa8.25□□□□□ -1.09
PRPF39-204ENST00000553605 DEFA3P59666 94 aa8.25□□□□□ -1.09
PRPF39-204ENST00000553605 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
PRPF39-204ENST00000553605 FOXI1Q12951 378 aa8.25□□□□□ -1.09
PRPF39-204ENST00000553605 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
PRPF39-204ENST00000553605 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
PRPF39-204ENST00000553605 LOC107984640A0A0U1RRK4 108 aa8.24□□□□□ -1.09
PRPF39-204ENST00000553605 NKX2-5P52952 324 aaPredicted RBP8.24□□□□□ -1.09
PRPF39-204ENST00000553605 HIST1H2BAQ96A08 127 aa8.24□□□□□ -1.09
PRPF39-204ENST00000553605 PGLYRP4Q96LB8 373 aa8.24□□□□□ -1.09
PRPF39-204ENST00000553605 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
PRPF39-204ENST00000553605 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
PRPF39-204ENST00000553605 SNAI2O43623 268 aa8.23□□□□□ -1.09
PRPF39-204ENST00000553605 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
PRPF39-204ENST00000553605 EIF5AP63241 154 aaKnown RBP8.23□□□□□ -1.09
PRPF39-204ENST00000553605 PPP1R1CQ8WVI7 109 aa8.23□□□□□ -1.09
PRPF39-204ENST00000553605 MUC17Q685J3 4493 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 UBE2G2P60604 165 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 UBE2G1P62253 170 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 FMC1Q96HJ9 113 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 AP1S3Q96PC3 154 aa8.22□□□□□ -1.09
PRPF39-204ENST00000553605 A0A087WZ39 114 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms