RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 RASL10AQ92737 203 aa4.31□□□□□ -1.72
TMEM106C-221ENST00000553217 VPREB3Q9UKI3 123 aa4.31□□□□□ -1.72
TMEM106C-221ENST00000553217 PHLDA3Q9Y5J5 127 aa4.31□□□□□ -1.72
TMEM106C-221ENST00000553217 TRBV7-1A0A0A6YYK4 115 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 NBR2O15453 112 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 ENSAO43768 121 aaKnown RBP4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 NHLRC4P0CG21 123 aaPredicted RBP4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 SMCPP49901 116 aaPredicted RBP4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 CCL8P80075 99 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 LOXL1Q08397 574 aaPredicted RBP4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 NSUN5P1Q3KNT7 163 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 ZNF876PQ49A33 203 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 C11orf71Q6IPW1 123 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 GAGE2AQ6NT46 116 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 METTL26Q96S19 204 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 EDA2RQ9HAV5 297 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 PYGO1Q9Y3Y4 419 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
TMEM106C-221ENST00000553217 PLCE1Q9P212 2302 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 ZANQ9Y493 2812 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 TRAV4A0A0B4J268 109 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 TRBV27A0A0K0K1C4 114 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 SMIM9A6NGZ8 99 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 TEX22C9J3V5 150 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 LYNX1G3V0Z9 82 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 M0R1W7 72 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 LST1O00453 97 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 NDUFC1O43677 76 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 NXPH4O95158 308 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 IGLV1-47P01700 117 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 IGHV4-31P0DP07 118 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 LYNX1P0DP58 116 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 INSL3P51460 131 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 MINOS1Q5TGZ0 78 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 HCP5Q6MZN7 132 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 FAM53AQ6NSI3 398 aaPredicted RBP4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 ZFP2Q6ZN57 461 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 SDIM1Q6ZPB5 146 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 FAM216BQ8N7L0 139 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 VSIG2Q96IQ7 327 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 ODF3Q96PU9 254 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 MCRIP2Q9BUT9 160 aaKnown RBP4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 CSDC2Q9Y534 153 aaKnown RBP4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 MINOS1-NBL1R4GNA1 71 aa4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 NIPBLQ6KC79 2804 aaeCLIP4.29□□□□□ -1.72
TMEM106C-221ENST00000553217 IGLV11-55A0A075B6I3 123 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TRGV11A0A075B6L2 103 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TRAV26-2A0A0B4J265 109 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 IGHV4-61A0A0C4DH41 118 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TMEM178BH3BS89 294 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 BUB1B-PAK6H3BSN5 160 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 K7EIM0 57 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 BRI3O95415 125 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 IGHV1-46P01743 117 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 LINC00205P59089 165 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 EBI3Q14213 229 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 ZNF56Q15929 161 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 MLANAQ16655 118 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TRPT1Q86TN4 253 aaKnown RBP4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 MAPKAPK5-AS1Q8N8E1 139 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 SPATA3Q8NHX4 192 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TMEM263Q8WUH6 116 aaKnown RBP4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 TPSG1Q9NRR2 321 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 DPM3Q9P2X0 92 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 ICOSQ9Y6W8 199 aa4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 FBN1P35555 2871 aaKnown RBP4.28□□□□□ -1.72
TMEM106C-221ENST00000553217 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.28□□□□□ -1.721e-6■■□□□ 14.5
TMEM106C-221ENST00000553217 SVEP1Q4LDE5 3571 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 A4D1N5 150 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 H3BUA1 57 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 SPRY3O43610 288 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 CD24P25063 80 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 DIAPH2-AS1Q14236 149 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 MSMPQ1L6U9 139 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 DUX4L9Q6RFH8 374 aaPredicted RBP4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 C5orf38Q86SI9 138 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 APRG1Q8IVJ8 170 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 C10orf105Q8TEF2 133 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 CCL13Q99616 98 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 BPESC1Q9GZL8 116 aa4.27□□□□□ -1.73
TMEM106C-221ENST00000553217 FBN3Q75N90 2809 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 TMSB15BA0A087X1C1 80 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 IGHV7-4-1A0A0J9YVY3 117 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 FAM236AA0A1B0GUQ0 79 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 FAM236BA0A1B0GV22 79 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 hADV29S1A0JD25 119 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 IGIPA6NJ69 53 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 H0YGX0 51 aa4.26□□□□□ -1.73
TMEM106C-221ENST00000553217 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms