RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	SCGB3A1	Q96QR1	104 aa		4.68	□□□□□ -1.66
PFKM-231	ENST00000553055	AMELY	Q99218	206 aa		4.68	□□□□□ -1.66
PFKM-231	ENST00000553055	SCRT1	Q9BWW7	348 aa		4.68	□□□□□ -1.66
PFKM-231	ENST00000553055	TTTY13	Q9BZ97	58 aa		4.68	□□□□□ -1.66
PFKM-231	ENST00000553055	ANK3	Q12955	4377 aa	Known RBP	4.67	□□□□□ -1.66
PFKM-231	ENST00000553055		H0YGG7	62 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055		H3BSH0	61 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055		J3QQQ9	107 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	HIST1H2BK	O60814	126 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	IGHV3-53	P01767	116 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	HIST1H2BJ	P06899	126 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	PSMB8	P28062	276 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	ZNF93	P35789	620 aa	Predicted RBP	4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	SUPT4H1	P63272	117 aa	Known RBP	4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	KHDC3L	Q587J8	217 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	ZFP2	Q6ZN57	461 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	MIR17HG	Q75NE6	70 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	OR5D14	Q8NGL3	314 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	SMCR5	Q8TEV8	140 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	MIEN1	Q9BRT3	115 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	LPAR5	Q9H1C0	372 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	TMEM242	Q9NWH2	141 aa		4.67	□□□□□ -1.66
PFKM-231	ENST00000553055	TRGV10	A0A0A0MS01	117 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	PIGBOS1	A0A0B4J2F0	54 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055		A0A1W2PQD3	144 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	CRYM-AS1	A6NIL9	109 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055		H3BQ15	152 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055		H3BQ85	93 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	TMEM256-PLSCR3	K7ERE1	68 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	PITX3	O75364	302 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	FABP2	P12104	132 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	RPS27	P42677	84 aa	Known RBP	4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	ELOB	Q15370	118 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	OR2T2	Q6IF00	324 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	GLIPR1L1	Q6UWM5	242 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	SAXO1	Q8IYX7	474 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	FAM213B	Q8TBF2	198 aa		4.66	□□□□□ -1.66
PFKM-231	ENST00000553055	IGHV1-58	A0A0C4DH39	117 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	TRBV7-6	A0A0J9YX20	115 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	METTL15P1	P0C7V9	234 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	FABP4	P15090	132 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	TAF9	Q16594	264 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	LINC00305	Q7Z4B0	112 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	ST20-AS1	Q8NBB2	130 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	HIST1H2BL	Q99880	126 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	MRPL32	Q9BYC8	188 aa	Known RBP	4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	LINC00470	Q9BZP3	86 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	NAA60	Q9H7X0	242 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	KIF25-AS1	Q9Y6Z4	181 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055		V9GYS6	101 aa		4.65	□□□□□ -1.67
PFKM-231	ENST00000553055	PRKDC	P78527	4128 aa	Known RBP	4.65	□□□□□ -1.67
PFKM-231	ENST00000553055		A0A0J9YW62	118 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	C19orf71	A6NCJ1	209 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	NAPSA	O96009	420 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	CXCL1	P09341	107 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	TRGC1	P0CF51	173 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	IQCJ	Q1A5X6	159 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	MUC7	Q8TAX7	377 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	KLF14	Q8TD94	323 aa	Predicted RBP	4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	ARHGAP5-AS1	Q96IT6	56 aa		4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	INTS1	Q8N201	2190 aa	Known RBP	4.64	□□□□□ -1.67
PFKM-231	ENST00000553055	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	TRAV1-1	A0A0B4J248	108 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	LOC107984640	A0A0U1RRK4	108 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	ODAM	A1E959	279 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055		M0R143	59 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	GEMIN2	O14893	280 aa	Known RBP	4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	ZNF728	P0DKX0	622 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	CD24	P25063	80 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	DYNLT3	P51808	116 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	HBB	P68871	147 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	NNAT	Q16517	81 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	SLC25A26	Q70HW3	274 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	OR5AS1	Q8N127	324 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	PRO1933	Q9H354	126 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	CBLN4	Q9NTU7	201 aa		4.63	□□□□□ -1.67
PFKM-231	ENST00000553055	TENM1	Q9UKZ4	2725 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	IGKV1-9	A0A0C4DH69	117 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	KLF7	O75840	302 aa	Predicted RBP	4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	CLPS	P04118	112 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	ZNF25	P17030	456 aa	Predicted RBP	4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	RHOG	P84095	191 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055		Q5XG85	94 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	AMMECR1L	Q6DCA0	310 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	PHF5A	Q7RTV0	110 aa	Known RBP	4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	EPDR1	Q9UM22	224 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	ALPK2	Q86TB3	2170 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	ARID1A	O14497	2285 aa		4.62	□□□□□ -1.67
PFKM-231	ENST00000553055	EPPK1	P58107	5090 aa	Known RBP	4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	IGKV1D-37	A0A075B6S9	117 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	IGHV3-15	A0A0B4J1V0	119 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	TRAV17	A0A0B4J275	112 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	ZNF727	A8MUV8	499 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055		H3BMG7	143 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	PANO1	I0J062	215 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	SDCBP	O00560	298 aa	Predicted RBP	4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	GNG7	O60262	68 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	TCL1B	O95988	128 aa		4.61	□□□□□ -1.67
PFKM-231	ENST00000553055	MSMB	P08118	114 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms