RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 SELENOKQ9Y6D0 94 aa7.64□□□□□ -1.19
RFX4-210ENST00000552773 CSPG4Q6UVK1 2322 aa7.64□□□□□ -1.19
RFX4-210ENST00000552773 NDUFA7O95182 113 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 TSHBP01222 138 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 SPANXB1Q9NS25 103 aaPredicted RBP7.63□□□□□ -1.19
RFX4-210ENST00000552773 NHP2Q9NX24 153 aaKnown RBP7.63□□□□□ -1.19
RFX4-210ENST00000552773 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 MYO18BQ8IUG5 2567 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 TRBV10-1A0A0K0K1A3 114 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 RS1O15537 224 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 IGHV3-53P01767 116 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 HTN1P15515 57 aa7.63□□□□□ -1.19
RFX4-210ENST00000552773 MORN3Q6PF18 240 aaPredicted RBP7.63□□□□□ -1.19
RFX4-210ENST00000552773 MUC4Q99102 2169 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 IGLV4-69A0A075B6H9 119 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 A0A1B0GWB2 263 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 LEPROTO15243 131 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 FXYD2P54710 66 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 COTL1Q14019 142 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 C18orf65Q6ZTR6 163 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 Q6ZVH6 145 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 MAPKAPK5-AS1Q8N8E1 139 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 RAB37Q96AX2 223 aa7.62□□□□□ -1.19
RFX4-210ENST00000552773 TRBV7-3A0A075B6L6 115 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 CD28P10747 220 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 PLA2G2AP14555 144 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 RPL39P62891 51 aaKnown RBP7.61□□□□□ -1.19
RFX4-210ENST00000552773 C12orf74Q32Q52 190 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 CFAP126Q5VTH2 177 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 UFSP1Q6NVU6 142 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 TIMM21Q9BVV7 248 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 CFAP46Q8IYW2 2715 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 ZNF462Q96JM2 2506 aa7.61□□□□□ -1.19
RFX4-210ENST00000552773 J3QQQ9 107 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 HILS1P60008 231 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 C11orf72Q8NBR9 251 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 TMEM263Q8WUH6 116 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 ZNF479Q96JC4 524 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 FAM208BQ5VWN6 2430 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 RBMY1BA6NDE4 496 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 RBMY1EA6NEQ0 496 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 J3QR89 54 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 RBMY1DP0C7P1 496 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 RBMY1A1P0DJD3 496 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 RBMY1CP0DJD4 496 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 RPL36AP83881 106 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 RBMY1FQ15415 496 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 LINC01006Q8NI28 216 aa7.6□□□□□ -1.19
RFX4-210ENST00000552773 RPL36ALQ969Q0 106 aaKnown RBP7.6□□□□□ -1.19
RFX4-210ENST00000552773 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 TMEM223A0PJW6 202 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 F8W1H4 67 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 P0DMU3 169 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 FAM231AP0DMU4 169 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 FAM231CP0DMU5 169 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 AZU1P20160 251 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 MRPS36P82909 103 aaKnown RBP7.59□□□□□ -1.19
RFX4-210ENST00000552773 DAZ2Q13117 558 aaKnown RBP7.59□□□□□ -1.19
RFX4-210ENST00000552773 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 DAZ4Q86SG3 579 aaKnown RBP7.59□□□□□ -1.19
RFX4-210ENST00000552773 C16orf74Q96GX8 76 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 AMELXQ99217 191 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 CITED2Q99967 270 aaPredicted RBP7.59□□□□□ -1.19
RFX4-210ENST00000552773 DAZ3Q9NR90 486 aaKnown RBP7.59□□□□□ -1.19
RFX4-210ENST00000552773 CREBBPQ92793 2442 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 NAV2Q8IVL1 2488 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 USP24Q9UPU5 2620 aa7.59□□□□□ -1.19
RFX4-210ENST00000552773 UBR5O95071 2799 aaPredicted RBP7.59□□□□□ -1.2
RFX4-210ENST00000552773 TRAV4A0A0B4J268 109 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 IGLL5B9A064 214 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 SAP30O75446 220 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
RFX4-210ENST00000552773 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 OCIAD2Q56VL3 154 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 PHLDA1Q8WV24 401 aaPredicted RBP7.58□□□□□ -1.2
RFX4-210ENST00000552773 COPS9Q8WXC6 57 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 TTTY13Q9BZ97 58 aa7.58□□□□□ -1.2
RFX4-210ENST00000552773 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.57□□□□□ -1.2
RFX4-210ENST00000552773 NDUFA11Q86Y39 141 aa7.57□□□□□ -1.2
RFX4-210ENST00000552773 XCL2Q9UBD3 114 aa7.57□□□□□ -1.2
RFX4-210ENST00000552773 A0A0J9YY99 117 aa7.57□□□□□ -1.2
RFX4-210ENST00000552773 A0A1W2PRX2 142 aa7.57□□□□□ -1.2
RFX4-210ENST00000552773 IGLV1-51P01701 117 aa7.57□□□□□ -1.2
RFX4-210ENST00000552773 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
RFX4-210ENST00000552773 ESM1Q9NQ30 184 aa7.57□□□□□ -1.2
RFX4-210ENST00000552773 CSDC2Q9Y534 153 aaKnown RBP7.57□□□□□ -1.2
RFX4-210ENST00000552773 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
RFX4-210ENST00000552773 H7C423 109 aa7.56□□□□□ -1.2
RFX4-210ENST00000552773 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
RFX4-210ENST00000552773 INSL3P51460 131 aa7.56□□□□□ -1.2
RFX4-210ENST00000552773 ZNRF2Q8NHG8 242 aa7.56□□□□□ -1.2
RFX4-210ENST00000552773 IL17DQ8TAD2 202 aa7.56□□□□□ -1.2
RFX4-210ENST00000552773 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
RFX4-210ENST00000552773 MRPL16Q9NX20 251 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms