RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 NPCDR1Q9BY65 106 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 PAM16Q9Y3D7 125 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
HOXB3-213ENST00000552000 IGKV2-24A0A0C4DH68 120 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 MUC21A0A0G2JKD1 596 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 H7C1H1 209 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 TAAR5O14804 337 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 EIF3GO75821 320 aaKnown RBP eCLIP3.32□□□□□ -1.88
HOXB3-213ENST00000552000 GCGP01275 180 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 TCRBP04435 133 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 S100A4P26447 101 aaKnown RBP3.32□□□□□ -1.88
HOXB3-213ENST00000552000 S100A11P31949 105 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 GNG5P63218 68 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 HBG1P69891 147 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 HBG2P69892 147 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 COX6A2Q02221 97 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
HOXB3-213ENST00000552000 FAM74A4Q5TZK3 123 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 COX8CQ7Z4L0 72 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 STX12Q86Y82 276 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 TMEM252Q8N6L7 170 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 LINC00469Q8N7U9 141 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 CHCHD5Q9BSY4 110 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 SLIRPQ9GZT3 109 aaKnown RBP3.32□□□□□ -1.88
HOXB3-213ENST00000552000 C11orf1Q9H5F2 150 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
HOXB3-213ENST00000552000 VAX2Q9UIW0 290 aa3.32□□□□□ -1.88
HOXB3-213ENST00000552000 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 TRBV6-8A0A0A6YYG3 113 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 FAM231BA6NCW3 169 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 PTTG1O95997 202 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 PVALBP20472 110 aaPredicted RBP3.31□□□□□ -1.88
HOXB3-213ENST00000552000 S100A10P60903 97 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 UBE2D3P61077 147 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 UBE2D2P62837 147 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
HOXB3-213ENST00000552000 ATP6V1FQ16864 119 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 LINC00269Q8N2A0 174 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 STPG4Q8N801 248 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 PRSS3P2Q8NHM4 247 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 RPL36ALQ969Q0 106 aaKnown RBP3.31□□□□□ -1.88
HOXB3-213ENST00000552000 LYRM2Q9NU23 88 aaPredicted RBP3.31□□□□□ -1.88
HOXB3-213ENST00000552000 FSIP2Q5CZC0 6907 aa3.31□□□□□ -1.88
HOXB3-213ENST00000552000 TRBV7-3A0A075B6L6 115 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 H3BVH4 76 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 NDUFB6O95139 128 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 RBX1P62877 108 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 GAGE6Q13070 117 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 PRR4Q16378 134 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 SMUG1Q53HV7 270 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 KHDC3LQ587J8 217 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 FAM74A1Q5RGS3 127 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 RNASEKQ6P5S7 137 aaKnown RBP3.3□□□□□ -1.88
HOXB3-213ENST00000552000 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 OR5AC2Q9NZP5 309 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 MBD2Q9UBB5 411 aa3.3□□□□□ -1.88
HOXB3-213ENST00000552000 TRAV26-2A0A0B4J265 109 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 TRBV10-1A0A0K0K1A3 114 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 NDUFS6O75380 124 aaKnown RBP3.29□□□□□ -1.88
HOXB3-213ENST00000552000 STAG3L2P0CL84 134 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 RPS10P46783 165 aaKnown RBP3.29□□□□□ -1.88
HOXB3-213ENST00000552000 RAB5CP51148 216 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 TAS2R45P59539 299 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 PKIAP61925 76 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 ZFP69Q49AA0 526 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 Q6ZRP5 223 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 PRNTQ86SH4 94 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 PRR26Q8N8Z3 221 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 OR5C1Q8NGR4 320 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 DEDD2Q8WXF8 326 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 KCNIP2Q9NS61 270 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 IL36BQ9NZH7 164 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 PSG8Q9UQ74 426 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 V9GYH0 126 aa3.29□□□□□ -1.88
HOXB3-213ENST00000552000 A0A096LNI7 61 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 NAP1L6A6NFF2 107 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 M0R381 172 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 IFNA7P01567 189 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 S100A6P06703 90 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 CTAG1AP78358 180 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 REG3AQ06141 175 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 NEXN-AS1Q8NBZ9 246 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 OR10G8Q8NGN5 311 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 SFRP2Q96HF1 295 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 MRPS26Q9BYN8 205 aaKnown RBP3.28□□□□□ -1.88
HOXB3-213ENST00000552000 WDR61Q9GZS3 305 aaKnown RBP3.28□□□□□ -1.88
HOXB3-213ENST00000552000 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 PSORS1C2Q9UIG4 136 aa3.28□□□□□ -1.88
HOXB3-213ENST00000552000 GRIFINA4D1Z8 144 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 B4DEV8 164 aa3.27□□□□□ -1.89
HOXB3-213ENST00000552000 C17orf112F2Z3M2 114 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms