RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GCHFRP30047 84 aa9.46□□□□□ -0.9
CACNB3-220ENST00000551716 IQCJQ1A5X6 159 aa9.46□□□□□ -0.9
CACNB3-220ENST00000551716 FAM162BQ5T6X4 162 aa9.46□□□□□ -0.9
CACNB3-220ENST00000551716 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
CACNB3-220ENST00000551716 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
CACNB3-220ENST00000551716 IGHV1-24A0A0C4DH33 117 aa9.45□□□□□ -0.9
CACNB3-220ENST00000551716 MUC21A0A0G2JKD1 596 aa9.45□□□□□ -0.9
CACNB3-220ENST00000551716 CDC34P49427 236 aaPredicted RBP9.45□□□□□ -0.9
CACNB3-220ENST00000551716 RAB5CP51148 216 aa9.45□□□□□ -0.9
CACNB3-220ENST00000551716 ZFP30Q9Y2G7 519 aa9.45□□□□□ -0.9
CACNB3-220ENST00000551716 CCDC160A6NGH7 325 aa9.44□□□□□ -0.9
CACNB3-220ENST00000551716 A6NHS1 94 aa9.44□□□□□ -0.9
CACNB3-220ENST00000551716 F5H697 171 aa9.44□□□□□ -0.9
CACNB3-220ENST00000551716 CRIP1P50238 77 aa9.44□□□□□ -0.9
CACNB3-220ENST00000551716 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
CACNB3-220ENST00000551716 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
CACNB3-220ENST00000551716 A0A1W2PRE2 83 aa9.43□□□□□ -0.9
CACNB3-220ENST00000551716 SH2D1AO60880 128 aa9.43□□□□□ -0.9
CACNB3-220ENST00000551716 CXorf1O96002 111 aa9.43□□□□□ -0.9
CACNB3-220ENST00000551716 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
CACNB3-220ENST00000551716 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
CACNB3-220ENST00000551716 RAB24Q969Q5 203 aa9.43□□□□□ -0.9
CACNB3-220ENST00000551716 SIX6O95475 246 aa9.42□□□□□ -0.9
CACNB3-220ENST00000551716 PET100P0DJ07 73 aa9.42□□□□□ -0.9
CACNB3-220ENST00000551716 RPL12P30050 165 aaKnown RBP9.42□□□□□ -0.9
CACNB3-220ENST00000551716 C15orf56Q8N910 161 aa9.42□□□□□ -0.9
CACNB3-220ENST00000551716 AQP10Q96PS8 301 aa9.42□□□□□ -0.9
CACNB3-220ENST00000551716 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
CACNB3-220ENST00000551716 CACNG7P62955 275 aa9.41□□□□□ -0.9
CACNB3-220ENST00000551716 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
CACNB3-220ENST00000551716 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
CACNB3-220ENST00000551716 ZNF471Q9BX82 626 aaPredicted RBP9.41□□□□□ -0.9
CACNB3-220ENST00000551716 NKX6-2Q9C056 277 aaPredicted RBP9.41□□□□□ -0.9
CACNB3-220ENST00000551716 A0A096LNI7 61 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 FAM240BA0A1B0GVZ2 78 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 MBP02144 154 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 SULT1A2P50226 295 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 ZNF674Q2M3X9 581 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 Q86TA4 180 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 PPP1R1CQ8WVI7 109 aa9.4□□□□□ -0.9
CACNB3-220ENST00000551716 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
CACNB3-220ENST00000551716 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
CACNB3-220ENST00000551716 IGLV4-60A0A075B6I1 120 aa9.38□□□□□ -0.91
CACNB3-220ENST00000551716 PEX7O00628 323 aa9.38□□□□□ -0.91
CACNB3-220ENST00000551716 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
CACNB3-220ENST00000551716 HIGD2BQ4VC39 106 aa9.38□□□□□ -0.91
CACNB3-220ENST00000551716 WFDC1Q9HC57 220 aa9.38□□□□□ -0.91
CACNB3-220ENST00000551716 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
CACNB3-220ENST00000551716 MPC2O95563 127 aa9.37□□□□□ -0.91
CACNB3-220ENST00000551716 PRR4Q16378 134 aa9.37□□□□□ -0.91
CACNB3-220ENST00000551716 ACTR3CQ9C0K3 210 aaPredicted RBP9.37□□□□□ -0.91
CACNB3-220ENST00000551716 UBE2L6O14933 153 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 SERF2P84101 59 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 MZT2BQ6NZ67 158 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 FMC1Q96HJ9 113 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 PSMG3Q9BT73 122 aaPredicted RBP9.36□□□□□ -0.91
CACNB3-220ENST00000551716 GFRA4Q9GZZ7 299 aa9.36□□□□□ -0.91
CACNB3-220ENST00000551716 CXCL1P09341 107 aa9.35□□□□□ -0.91
CACNB3-220ENST00000551716 UBE2G1P62253 170 aa9.35□□□□□ -0.91
CACNB3-220ENST00000551716 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
CACNB3-220ENST00000551716 SSBP4Q9BWG4 385 aaPredicted RBP9.34□□□□□ -0.91
CACNB3-220ENST00000551716 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.91
CACNB3-220ENST00000551716 MT-ND6P03923 174 aa9.33□□□□□ -0.92
CACNB3-220ENST00000551716 OR5AL1P0C617 328 aa9.33□□□□□ -0.92
CACNB3-220ENST00000551716 ATP6V0CP27449 155 aa9.33□□□□□ -0.92
CACNB3-220ENST00000551716 H2BFSP57053 126 aa9.33□□□□□ -0.92
CACNB3-220ENST00000551716 FER1L6-AS1Q8NA97 138 aa9.33□□□□□ -0.92
CACNB3-220ENST00000551716 DIRC1Q969H9 104 aa9.33□□□□□ -0.92
CACNB3-220ENST00000551716 M0QY20 66 aa9.32□□□□□ -0.92
CACNB3-220ENST00000551716 SNAI2O43623 268 aa9.32□□□□□ -0.92
CACNB3-220ENST00000551716 LTAP01374 205 aa9.32□□□□□ -0.92
CACNB3-220ENST00000551716 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
CACNB3-220ENST00000551716 PGLYRP4Q96LB8 373 aa9.32□□□□□ -0.92
CACNB3-220ENST00000551716 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
CACNB3-220ENST00000551716 CCDC32Q9BV29 185 aa9.32□□□□□ -0.92
CACNB3-220ENST00000551716 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
CACNB3-220ENST00000551716 UBE2G2P60604 165 aa9.31□□□□□ -0.92
CACNB3-220ENST00000551716 TCEAL7Q9BRU2 100 aa9.31□□□□□ -0.92
CACNB3-220ENST00000551716 MED28Q9H204 178 aa9.31□□□□□ -0.92
CACNB3-220ENST00000551716 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
CACNB3-220ENST00000551716 INO80EQ8NBZ0 244 aaPredicted RBP9.3□□□□□ -0.92
CACNB3-220ENST00000551716 CARD19Q96LW7 228 aa9.3□□□□□ -0.92
CACNB3-220ENST00000551716 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
CACNB3-220ENST00000551716 PTTG1IPP53801 180 aa9.29□□□□□ -0.92
CACNB3-220ENST00000551716 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
CACNB3-220ENST00000551716 AMTP48728 403 aa9.28□□□□□ -0.92
CACNB3-220ENST00000551716 NKX2-5P52952 324 aaPredicted RBP9.28□□□□□ -0.92
CACNB3-220ENST00000551716 SSTP61278 116 aa9.28□□□□□ -0.92
CACNB3-220ENST00000551716 COTL1Q14019 142 aa9.28□□□□□ -0.92
CACNB3-220ENST00000551716 C1orf137Q5JT78 98 aa9.28□□□□□ -0.92
CACNB3-220ENST00000551716 TRAV1-1A0A0B4J248 108 aa9.27□□□□□ -0.93
CACNB3-220ENST00000551716 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
CACNB3-220ENST00000551716 RASL11AQ6T310 242 aa9.27□□□□□ -0.93
CACNB3-220ENST00000551716 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
CACNB3-220ENST00000551716 LOC107984640A0A0U1RRK4 108 aa9.26□□□□□ -0.93
CACNB3-220ENST00000551716 CTXND1A0A1B0GTU2 59 aa9.26□□□□□ -0.93
CACNB3-220ENST00000551716 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
CACNB3-220ENST00000551716 S100A9P06702 114 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms