RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 MDFICQ9P1T7 246 aa17.54■□□□□ 0.4
NPAS3-211ENST00000551634 DEFB104AQ8WTQ1 72 aa17.53■□□□□ 0.4
NPAS3-211ENST00000551634 CCL19Q99731 98 aa17.53■□□□□ 0.4
NPAS3-211ENST00000551634 FLNBO75369 2602 aaKnown RBP17.53■□□□□ 0.4
NPAS3-211ENST00000551634 ZNF688P0C7X2 276 aa17.53■□□□□ 0.4
NPAS3-211ENST00000551634 Q8N1Y9 231 aa17.52■□□□□ 0.4
NPAS3-211ENST00000551634 VPS13CQ709C8 3753 aa17.52■□□□□ 0.4
NPAS3-211ENST00000551634 IGHV1OR15-1A0A075B7D0 117 aa17.52■□□□□ 0.39
NPAS3-211ENST00000551634 LEPROTO15243 131 aa17.52■□□□□ 0.39
NPAS3-211ENST00000551634 PRO1854Q9UHT4 67 aa17.51■□□□□ 0.39
NPAS3-211ENST00000551634 TMEM223A0PJW6 202 aa17.51■□□□□ 0.39
NPAS3-211ENST00000551634 TMEM89A2RUT3 159 aa17.51■□□□□ 0.39
NPAS3-211ENST00000551634 K7EQG2 157 aa17.5■□□□□ 0.39
NPAS3-211ENST00000551634 SBSPONQ8IVN8 264 aa17.5■□□□□ 0.39
NPAS3-211ENST00000551634 C20orf203Q8NBC4 194 aa17.5■□□□□ 0.39
NPAS3-211ENST00000551634 SFTA2Q6UW10 78 aa17.5■□□□□ 0.39
NPAS3-211ENST00000551634 TCL1BO95988 128 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 GNLYP22749 145 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 IGHV4-30-2A0A087WSY4 118 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 P0DMU3 169 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 FAM231AP0DMU4 169 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 FAM231CP0DMU5 169 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 TEN1Q86WV5 123 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 VCX2Q9H322 139 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 TRAV12-2A0A075B6T6 113 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 RNF152Q8N8N0 203 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 PPDPFLQ8WWR9 84 aa17.49■□□□□ 0.39
NPAS3-211ENST00000551634 I3L3M4 83 aa17.48■□□□□ 0.39
NPAS3-211ENST00000551634 ZNF418Q8TF45 676 aaPredicted RBP17.48■□□□□ 0.39
NPAS3-211ENST00000551634 PRORYQ9H606 182 aa17.48■□□□□ 0.39
NPAS3-211ENST00000551634 A0A1B0GV72 72 aa17.48■□□□□ 0.39
NPAS3-211ENST00000551634 ATP5J2P56134 94 aa17.48■□□□□ 0.39
NPAS3-211ENST00000551634 ZFHX3Q15911 3703 aa17.47■□□□□ 0.39
NPAS3-211ENST00000551634 IGKV3-20P01619 116 aa17.46■□□□□ 0.39
NPAS3-211ENST00000551634 TMEM95Q3KNT9 176 aa17.46■□□□□ 0.39
NPAS3-211ENST00000551634 ZNF22P17026 224 aaPredicted RBP17.46■□□□□ 0.39
NPAS3-211ENST00000551634 A8MWV9 139 aa17.45■□□□□ 0.38
NPAS3-211ENST00000551634 B4DSR2 109 aa17.45■□□□□ 0.38
NPAS3-211ENST00000551634 RHODO00212 210 aa17.45■□□□□ 0.38
NPAS3-211ENST00000551634 TCTEX1D4Q5JR98 221 aa17.45■□□□□ 0.38
NPAS3-211ENST00000551634 OPRPNQ99935 248 aaPredicted RBP17.45■□□□□ 0.38
NPAS3-211ENST00000551634 CDIP1Q9H305 208 aa17.45■□□□□ 0.38
NPAS3-211ENST00000551634 TRGV11A0A075B6L2 103 aa17.45■□□□□ 0.38
NPAS3-211ENST00000551634 GATA3P23771 443 aa17.44■□□□□ 0.38
NPAS3-211ENST00000551634 SPINK13Q1W4C9 94 aa17.44■□□□□ 0.38
NPAS3-211ENST00000551634 EDA2RQ9HAV5 297 aa17.44■□□□□ 0.38
NPAS3-211ENST00000551634 AVPP01185 164 aa17.44■□□□□ 0.38
NPAS3-211ENST00000551634 SCGB1C2P0DMR2 95 aa17.43■□□□□ 0.38
NPAS3-211ENST00000551634 IGLV4-3A0A075B6K6 122 aa17.43■□□□□ 0.38
NPAS3-211ENST00000551634 A0A0B4J2C4 111 aa17.43■□□□□ 0.38
NPAS3-211ENST00000551634 A4D1N5 150 aa17.43■□□□□ 0.38
NPAS3-211ENST00000551634 CARD19Q96LW7 228 aa17.42■□□□□ 0.38
NPAS3-211ENST00000551634 PTH2Q96A98 100 aa17.42■□□□□ 0.38
NPAS3-211ENST00000551634 PYGO1Q9Y3Y4 419 aa17.42■□□□□ 0.38
NPAS3-211ENST00000551634 M0QXV9 152 aa17.41■□□□□ 0.38
NPAS3-211ENST00000551634 IGHV3-33P01772 117 aa17.41■□□□□ 0.38
NPAS3-211ENST00000551634 CRYBA4P53673 196 aa17.41■□□□□ 0.38
NPAS3-211ENST00000551634 TMEM263Q8WUH6 116 aaKnown RBP17.41■□□□□ 0.38
NPAS3-211ENST00000551634 NOTCH2Q04721 2471 aa17.4■□□□□ 0.38
NPAS3-211ENST00000551634 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.4■□□□□ 0.38
NPAS3-211ENST00000551634 A0A0J9YXV3 536 aa17.4■□□□□ 0.38
NPAS3-211ENST00000551634 POLQO75417 2590 aa17.39■□□□□ 0.37
NPAS3-211ENST00000551634 IGHV4-59P01825 116 aa17.39■□□□□ 0.37
NPAS3-211ENST00000551634 ERG28Q9UKR5 140 aa17.39■□□□□ 0.37
NPAS3-211ENST00000551634 USP9YO00507 2555 aaPredicted RBP17.38■□□□□ 0.37
NPAS3-211ENST00000551634 DOPEY2Q9Y3R5 2298 aa17.38■□□□□ 0.37
NPAS3-211ENST00000551634 C10orf99Q6UWK7 81 aa17.38■□□□□ 0.37
NPAS3-211ENST00000551634 CELSR1Q9NYQ6 3014 aa17.38■□□□□ 0.37
NPAS3-211ENST00000551634 TRAV2A0A0B4J234 112 aa17.38■□□□□ 0.37
NPAS3-211ENST00000551634 M0R2P5 195 aa17.38■□□□□ 0.37
NPAS3-211ENST00000551634 MUSTN1Q8IVN3 82 aa17.38■□□□□ 0.37
NPAS3-211ENST00000551634 SYNJ2BPP57105 145 aa17.37■□□□□ 0.37
NPAS3-211ENST00000551634 SETXQ7Z333 2677 aaKnown RBP17.37■□□□□ 0.37
NPAS3-211ENST00000551634 ABCA12Q86UK0 2595 aa17.37■□□□□ 0.37
NPAS3-211ENST00000551634 DEFB112Q30KQ8 113 aa17.37■□□□□ 0.37
NPAS3-211ENST00000551634 EIF4EBP3O60516 100 aaPredicted RBP17.36■□□□□ 0.37
NPAS3-211ENST00000551634 UBR5O95071 2799 aaPredicted RBP17.36■□□□□ 0.37
NPAS3-211ENST00000551634 FHL3Q13643 280 aa17.36■□□□□ 0.37
NPAS3-211ENST00000551634 SPG11Q96JI7 2443 aa17.36■□□□□ 0.37
NPAS3-211ENST00000551634 RAX2Q96IS3 184 aa17.35■□□□□ 0.37
NPAS3-211ENST00000551634 SPINK8P0C7L1 97 aa17.35■□□□□ 0.37
NPAS3-211ENST00000551634 CKS1BP61024 79 aa17.35■□□□□ 0.37
NPAS3-211ENST00000551634 MRPS36P82909 103 aaKnown RBP17.35■□□□□ 0.37
NPAS3-211ENST00000551634 Q6ZUT4 128 aa17.35■□□□□ 0.37
NPAS3-211ENST00000551634 ANKRD29Q8N6D5 301 aa17.35■□□□□ 0.37
NPAS3-211ENST00000551634 PTPN13Q12923 2485 aa17.34■□□□□ 0.37
NPAS3-211ENST00000551634 A0A0J9YXY3 114 aa17.34■□□□□ 0.37
NPAS3-211ENST00000551634 DSCR9P59020 149 aa17.34■□□□□ 0.37
NPAS3-211ENST00000551634 SLC25A20O43772 301 aa17.34■□□□□ 0.37
NPAS3-211ENST00000551634 IGHV3-64A0A075B6Q5 118 aa17.34■□□□□ 0.37
NPAS3-211ENST00000551634 ELANEP08246 267 aa17.34■□□□□ 0.37
NPAS3-211ENST00000551634 TMEM262E9PQX1 116 aa17.33■□□□□ 0.36
NPAS3-211ENST00000551634 IGHV3-30-3P0DP02 117 aa17.33■□□□□ 0.36
NPAS3-211ENST00000551634 CD28P10747 220 aa17.33■□□□□ 0.36
NPAS3-211ENST00000551634 TIMM21Q9BVV7 248 aa17.33■□□□□ 0.36
NPAS3-211ENST00000551634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.33■□□□□ 0.36
NPAS3-211ENST00000551634 PIK3CD-AS1Q5SR53 167 aa17.32■□□□□ 0.36
NPAS3-211ENST00000551634 TGFAP01135 160 aa17.32■□□□□ 0.36
NPAS3-211ENST00000551634 FAM104AQ969W3 186 aa17.31■□□□□ 0.36
NPAS3-211ENST00000551634 MT-ATP8P03928 68 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms