RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 HIST1H2BHQ93079 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BNQ99877 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BMQ99879 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 ST20Q9HBF5 79 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
NEK3-203ENST00000551355 TNFRSF18Q9Y5U5 241 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 K7EMI3 77 aa7.35□□□□□ -1.23
NEK3-203ENST00000551355 NCR2O95944 276 aa7.35□□□□□ -1.23
NEK3-203ENST00000551355 PMCHP20382 165 aa7.35□□□□□ -1.23
NEK3-203ENST00000551355 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
NEK3-203ENST00000551355 RPL36AP83881 106 aaKnown RBP7.35□□□□□ -1.23
NEK3-203ENST00000551355 SLC25A29Q8N8R3 303 aa7.35□□□□□ -1.23
NEK3-203ENST00000551355 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
NEK3-203ENST00000551355 RPL36ALQ969Q0 106 aaKnown RBP7.35□□□□□ -1.23
NEK3-203ENST00000551355 TRBV7-3A0A075B6L6 115 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 H3BNG1 76 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 VCYO14598 125 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 NPYP01303 97 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 S100A6P06703 90 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 CRYBA4P53673 196 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 Q6ZSN1 163 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 SH2D6Q7Z4S9 175 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 BAGE3Q86Y29 109 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 NBEAL2Q6ZNJ1 2754 aa7.34□□□□□ -1.23
NEK3-203ENST00000551355 TRAV10A0A0B4J240 114 aa7.33□□□□□ -1.24
NEK3-203ENST00000551355 TRBV27A0A0K0K1C4 114 aa7.33□□□□□ -1.24
NEK3-203ENST00000551355 F5H768 121 aa7.33□□□□□ -1.24
NEK3-203ENST00000551355 PAX4O43316 350 aa7.33□□□□□ -1.24
NEK3-203ENST00000551355 G0S2P27469 103 aa7.33□□□□□ -1.24
NEK3-203ENST00000551355 COA6Q5JTJ3 125 aaKnown RBP7.33□□□□□ -1.24
NEK3-203ENST00000551355 DAZ4Q86SG3 579 aaKnown RBP7.33□□□□□ -1.24
NEK3-203ENST00000551355 CHCHD1Q96BP2 118 aaKnown RBP7.33□□□□□ -1.24
NEK3-203ENST00000551355 RPL39LQ96EH5 51 aaKnown RBP7.33□□□□□ -1.24
NEK3-203ENST00000551355 KIR2DL4Q99706 377 aa7.33□□□□□ -1.24
NEK3-203ENST00000551355 DAZ3Q9NR90 486 aaKnown RBP7.33□□□□□ -1.24
NEK3-203ENST00000551355 SDHAF1A6NFY7 115 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 GAS8-AS1O95177 125 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 LINC00614P0C842 121 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 HOXA5P20719 270 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
NEK3-203ENST00000551355 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
NEK3-203ENST00000551355 Q6ZTC4 211 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 FA2HQ7L5A8 372 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 Q8N8P6 123 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 NEXN-AS1Q8NBZ9 246 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 SMIM2Q9BVW6 85 aa7.32□□□□□ -1.24
NEK3-203ENST00000551355 DEFB131BA0A096LNP1 70 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 LOC389332A0A1B0GUA5 103 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 LINC01546A6NGU7 62 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 I3L3M4 83 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 HTN3P15516 51 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 NDUFA6P56556 154 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 TMEM97Q5BJF2 176 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 NIT1Q86X76 327 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 ZNRF2Q8NHG8 242 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
NEK3-203ENST00000551355 TRAV26-1A0A087WT03 109 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 LINC01549A6NIU2 74 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 P0DMU3 169 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 FAM231AP0DMU4 169 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 FAM231CP0DMU5 169 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 ESDP10768 282 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 GYPEP15421 78 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
NEK3-203ENST00000551355 UBE2D3P61077 147 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 UBE2D2P62837 147 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 MRPL23Q16540 153 aaKnown RBP7.3□□□□□ -1.24
NEK3-203ENST00000551355 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 ICOSQ9Y6W8 199 aa7.3□□□□□ -1.24
NEK3-203ENST00000551355 MEGF8Q7Z7M0 2845 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 IGLV2-18A0A075B6J9 118 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 HSBP1O75506 76 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 SERF1AO75920 110 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 FCER1GP30273 86 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 GAGE1Q13065 139 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 GAGE4Q13068 117 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 GAGE5Q13069 117 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 COTL1Q14019 142 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 LAGE3Q14657 143 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 IQCJQ1A5X6 159 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 GAGE13Q4V321 117 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
NEK3-203ENST00000551355 VSIG2Q96IQ7 327 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 GTSF1LQ9H1H1 148 aa7.29□□□□□ -1.24
NEK3-203ENST00000551355 TMA7Q9Y2S6 64 aaKnown RBP7.29□□□□□ -1.24
NEK3-203ENST00000551355 LCE2BO14633 110 aa7.28□□□□□ -1.24
NEK3-203ENST00000551355 LINC00694P0DN24 101 aa7.28□□□□□ -1.24
NEK3-203ENST00000551355 C15orf53Q8NAA6 179 aa7.28□□□□□ -1.24
NEK3-203ENST00000551355 ATP6V0E2Q8NHE4 81 aa7.28□□□□□ -1.24
NEK3-203ENST00000551355 A0A0J9YY99 117 aa7.27□□□□□ -1.25
NEK3-203ENST00000551355 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
NEK3-203ENST00000551355 SMAGPQ0VAQ4 97 aa7.27□□□□□ -1.25
NEK3-203ENST00000551355 NEGR1Q7Z3B1 354 aa7.27□□□□□ -1.25
NEK3-203ENST00000551355 PHLDA1Q8WV24 401 aaPredicted RBP7.27□□□□□ -1.25
NEK3-203ENST00000551355 TMEM18Q96B42 140 aa7.27□□□□□ -1.25
NEK3-203ENST00000551355 PACRGQ96M98 296 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms