RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 C18orf15Q96N68 181 aa9.06□□□□□ -0.96
CACNB3-217ENST00000550483 KIR2DL4Q99706 377 aa9.06□□□□□ -0.96
CACNB3-217ENST00000550483 TMEM70Q9BUB7 260 aa9.06□□□□□ -0.96
CACNB3-217ENST00000550483 MAP1LC3CQ9BXW4 147 aa9.06□□□□□ -0.96
CACNB3-217ENST00000550483 JPT2Q9H910 190 aa9.06□□□□□ -0.96
CACNB3-217ENST00000550483 MRPL16Q9NX20 251 aaKnown RBP9.06□□□□□ -0.96
CACNB3-217ENST00000550483 SORL1Q92673 2214 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 TRBV27A0A0K0K1C4 114 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 IGHV4-30-4P0DP06 118 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 MIFP14174 115 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
CACNB3-217ENST00000550483 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 TP53TG1Q9Y2A0 90 aa9.05□□□□□ -0.96
CACNB3-217ENST00000550483 TRBV10-1A0A0K0K1A3 114 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 ATP5LO75964 103 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 GAS8-AS1O95177 125 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 POLR2KP53803 58 aaKnown RBP9.04□□□□□ -0.96
CACNB3-217ENST00000550483 KRTDAPP60985 99 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 PET117Q6UWS5 81 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 SPATA12Q7Z6I5 190 aa9.04□□□□□ -0.96
CACNB3-217ENST00000550483 RPL39LQ96EH5 51 aaKnown RBP9.04□□□□□ -0.96
CACNB3-217ENST00000550483 MUC4Q99102 2169 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 PLAC8L1A1L4L8 177 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 RHOHQ15669 191 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 NOP10Q9NPE3 64 aaKnown RBP9.03□□□□□ -0.96
CACNB3-217ENST00000550483 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
CACNB3-217ENST00000550483 TRGV2A0A075B6R0 118 aa9.02□□□□□ -0.97
CACNB3-217ENST00000550483 I3L3M4 83 aa9.02□□□□□ -0.97
CACNB3-217ENST00000550483 NUDT3O95989 172 aa9.02□□□□□ -0.97
CACNB3-217ENST00000550483 LINC00612Q8N6U2 182 aa9.02□□□□□ -0.97
CACNB3-217ENST00000550483 RNF183Q96D59 192 aa9.02□□□□□ -0.97
CACNB3-217ENST00000550483 X6R8D5 127 aa9.02□□□□□ -0.97
CACNB3-217ENST00000550483 A0A096LNJ9 63 aa9.01□□□□□ -0.97
CACNB3-217ENST00000550483 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
CACNB3-217ENST00000550483 PRM2P04554 102 aa9.01□□□□□ -0.97
CACNB3-217ENST00000550483 Q6ZTI0 123 aa9.01□□□□□ -0.97
CACNB3-217ENST00000550483 IFI27L1Q96BM0 104 aa9.01□□□□□ -0.97
CACNB3-217ENST00000550483 TRBV6-4A0A1B0GX49 114 aa9□□□□□ -0.97
CACNB3-217ENST00000550483 KRTAP10-11P60412 298 aa9□□□□□ -0.97
CACNB3-217ENST00000550483 DEFB135Q30KP9 77 aa9□□□□□ -0.97
CACNB3-217ENST00000550483 OR11H2Q8NH07 326 aa9□□□□□ -0.97
CACNB3-217ENST00000550483 CYSLTR1Q9Y271 337 aa9□□□□□ -0.97
CACNB3-217ENST00000550483 K7EQD1 137 aa8.99□□□□□ -0.97
CACNB3-217ENST00000550483 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
CACNB3-217ENST00000550483 TEX43Q6ZNM6 134 aa8.99□□□□□ -0.97
CACNB3-217ENST00000550483 RPL36ALQ969Q0 106 aaKnown RBP8.99□□□□□ -0.97
CACNB3-217ENST00000550483 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
CACNB3-217ENST00000550483 GAGE12BA1L429 117 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
CACNB3-217ENST00000550483 GAGE7O76087 117 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 NPSP0C0P6 89 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 GAGE12FP0CL80 117 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 GAGE12GP0CL81 117 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 GAGE12IP0CL82 117 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 LGALS9CQ6DKI2 356 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 TENM3Q9P273 2699 aa8.98□□□□□ -0.97
CACNB3-217ENST00000550483 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 IGHV3-73A0A0B4J1V6 119 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 SMAGPQ0VAQ4 97 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 C2orf66Q6UXQ4 117 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 DAZ4Q86SG3 579 aaKnown RBP8.97□□□□□ -0.97
CACNB3-217ENST00000550483 NEXN-AS1Q8NBZ9 246 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 PRADC1Q9BSG0 188 aa8.97□□□□□ -0.97
CACNB3-217ENST00000550483 DAZ3Q9NR90 486 aaKnown RBP8.97□□□□□ -0.97
CACNB3-217ENST00000550483 G3V4G9 280 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 TSTD3H0UI37 97 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 TMEM97Q5BJF2 176 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.98
CACNB3-217ENST00000550483 ERASQ7Z444 233 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 Q8N976 141 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 TIMM17AQ99595 171 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 VAMP8Q9BV40 100 aa8.96□□□□□ -0.98
CACNB3-217ENST00000550483 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 IGHV4-28A0A0C4DH34 117 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 HSBP1L1C9JCN9 74 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 SPART-AS1P0CW21 52 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 EMP1P54849 157 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 PKIAP61925 76 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 COTL1Q14019 142 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 Q6ZN92 141 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 Q8NAQ8 132 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 SCGB3A1Q96QR1 104 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
CACNB3-217ENST00000550483 TSHBP01222 138 aa8.94□□□□□ -0.98
CACNB3-217ENST00000550483 PRSS1P07477 247 aa8.94□□□□□ -0.98
CACNB3-217ENST00000550483 FAM222AQ5U5X8 452 aa8.94□□□□□ -0.98
CACNB3-217ENST00000550483 LINC00173Q6ZV60 143 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms