RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 ZNF56Q15929 161 aa7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 KCNIP4Q6PIL6 250 aa7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 LINC00269Q8N2A0 174 aa7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 NKX6-2Q9C056 277 aaPredicted RBP7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 GFRA4Q9GZZ7 299 aa7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 CYTL1Q9NRR1 136 aa7.35□□□□□ -1.23
SMARCD1-208ENST00000550280 MAP1LC3B2A6NCE7 125 aa7.34□□□□□ -1.23
SMARCD1-208ENST00000550280 FHITP49789 147 aa7.34□□□□□ -1.23
SMARCD1-208ENST00000550280 GAGE6Q13070 117 aa7.34□□□□□ -1.23
SMARCD1-208ENST00000550280 Q6ZRU5 148 aa7.34□□□□□ -1.23
SMARCD1-208ENST00000550280 MLST8Q9BVC4 326 aa7.34□□□□□ -1.23
SMARCD1-208ENST00000550280 MAP1LC3BQ9GZQ8 125 aa7.34□□□□□ -1.23
SMARCD1-208ENST00000550280 IGLV10-54A0A075B6I4 117 aa7.33□□□□□ -1.24
SMARCD1-208ENST00000550280 CXCL1P09341 107 aa7.33□□□□□ -1.24
SMARCD1-208ENST00000550280 GIPP09681 153 aaPredicted RBP7.33□□□□□ -1.24
SMARCD1-208ENST00000550280 CNBPP62633 177 aaKnown RBP7.33□□□□□ -1.24
SMARCD1-208ENST00000550280 C20orf203Q8NBC4 194 aa7.33□□□□□ -1.24
SMARCD1-208ENST00000550280 IGLV4-60A0A075B6I1 120 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 A0A087WYN8 130 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 FXYD6-FXYD2A0A087WZ82 144 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 BORCS7-ASMTA0A0B4J1R7 106 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 SCO2A0A1W2PP80 73 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 AKR1C3P42330 323 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 IQCJQ1A5X6 159 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 AKR1C8PQ5T2L2 129 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 DERL1Q9BUN8 251 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 MED28Q9H204 178 aa7.32□□□□□ -1.24
SMARCD1-208ENST00000550280 PAGE4O60829 102 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 OR5AL1P0C617 328 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 SSTP61278 116 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 REG3AQ06141 175 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 CST9LP1Q5W188 147 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 INO80EQ8NBZ0 244 aaPredicted RBP7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 SPACA4Q8TDM5 124 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 TCEAL7Q9BRU2 100 aa7.31□□□□□ -1.24
SMARCD1-208ENST00000550280 M0QY20 66 aa7.3□□□□□ -1.24
SMARCD1-208ENST00000550280 CLRN3Q8NCR9 226 aa7.3□□□□□ -1.24
SMARCD1-208ENST00000550280 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 A0A0D9SG52 128 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 hDV102S1A0JD36 115 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 F5H697 171 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 PHOX2AO14813 284 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 PKIAP61925 76 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 SPANXN1Q5VSR9 72 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 PLAC8Q9NZF1 115 aa7.29□□□□□ -1.24
SMARCD1-208ENST00000550280 IGLC6P0CF74 106 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 GZMBP10144 247 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 TMEM97Q5BJF2 176 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 SUMO4Q6EEV6 95 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 BAGE2Q86Y30 109 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 C15orf56Q8N910 161 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 STOML3Q8TAV4 291 aa7.28□□□□□ -1.24
SMARCD1-208ENST00000550280 IGHV3-64A0A075B6Q5 118 aa7.27□□□□□ -1.25
SMARCD1-208ENST00000550280 IGHV1-24A0A0C4DH33 117 aa7.27□□□□□ -1.25
SMARCD1-208ENST00000550280 A0A1B0GV50 99 aa7.27□□□□□ -1.25
SMARCD1-208ENST00000550280 RAB5CP51148 216 aa7.27□□□□□ -1.25
SMARCD1-208ENST00000550280 MBD3L1Q8WWY6 194 aa7.27□□□□□ -1.25
SMARCD1-208ENST00000550280 RNF185Q96GF1 192 aa7.27□□□□□ -1.25
SMARCD1-208ENST00000550280 A0A1B0GUV1 79 aa7.26□□□□□ -1.25
SMARCD1-208ENST00000550280 NKX2-5P52952 324 aaPredicted RBP7.26□□□□□ -1.25
SMARCD1-208ENST00000550280 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
SMARCD1-208ENST00000550280 AP1S3Q96PC3 154 aa7.26□□□□□ -1.25
SMARCD1-208ENST00000550280 TRAV8-4A0A0B4J246 113 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 SMLR1H3BR10 107 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 ARPC5O15511 151 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 P01737 135 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 MGPP08493 103 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 TMUB2Q71RG4 321 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 SFT2D1Q8WV19 159 aa7.25□□□□□ -1.25
SMARCD1-208ENST00000550280 LPAP08519 4548 aa7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 S100A9P06702 114 aaKnown RBP7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 RPL35P42766 123 aaKnown RBP7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 PRR3P79522 188 aaKnown RBP7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 COX6A2Q02221 97 aa7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 FAM213BQ8TBF2 198 aa7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 TMEM243Q9BU79 118 aa7.24□□□□□ -1.25
SMARCD1-208ENST00000550280 C19orf71A6NCJ1 209 aa7.23□□□□□ -1.25
SMARCD1-208ENST00000550280 SMIM17P0DL12 118 aa7.23□□□□□ -1.25
SMARCD1-208ENST00000550280 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
SMARCD1-208ENST00000550280 CCL20P78556 96 aa7.23□□□□□ -1.25
SMARCD1-208ENST00000550280 FER1L6-AS1Q8NA97 138 aa7.23□□□□□ -1.25
SMARCD1-208ENST00000550280 PGLYRP4Q96LB8 373 aa7.23□□□□□ -1.25
SMARCD1-208ENST00000550280 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 RASL11AQ6T310 242 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 C11orf52Q96A22 123 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 DPH3Q96FX2 82 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 TPPP3Q9BW30 176 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
SMARCD1-208ENST00000550280 A0A096LNI7 61 aa7.21□□□□□ -1.26
SMARCD1-208ENST00000550280 IGKV2-24A0A0C4DH68 120 aa7.21□□□□□ -1.26
SMARCD1-208ENST00000550280 MAJINQ3KP22 176 aa7.21□□□□□ -1.26
SMARCD1-208ENST00000550280 CENPWQ5EE01 88 aa7.21□□□□□ -1.26
SMARCD1-208ENST00000550280 KCNRGQ8N5I3 272 aa7.21□□□□□ -1.26
SMARCD1-208ENST00000550280 OR2D3Q8NGH3 330 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms