RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 RBMY1A1P0DJD3 496 aaKnown RBP6.54□□□□□ -1.36
TMEM116-209ENST00000550020 RBMY1CP0DJD4 496 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 CD28P10747 220 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 HILS1P60008 231 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 SRSF9Q13242 221 aaKnown RBP eCLIP6.54□□□□□ -1.36
TMEM116-209ENST00000550020 RBMY1FQ15415 496 aaKnown RBP6.54□□□□□ -1.36
TMEM116-209ENST00000550020 TMEM170BQ5T4T1 132 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 LYRM7Q5U5X0 104 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 CFAP126Q5VTH2 177 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 MAPKAPK5-AS1Q8N8E1 139 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 NHP2Q9NX24 153 aaKnown RBP6.54□□□□□ -1.36
TMEM116-209ENST00000550020 SPCS1Q9Y6A9 102 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 IGSF10Q6WRI0 2623 aa6.54□□□□□ -1.36
TMEM116-209ENST00000550020 ACACBO00763 2458 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 TRBV10-1A0A0K0K1A3 114 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 A0A1W2PRX2 142 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 LEPROTO15243 131 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 FXYD2P54710 66 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 RPL39P62891 51 aaKnown RBP6.53□□□□□ -1.36
TMEM116-209ENST00000550020 COTL1Q14019 142 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 UFSP1Q6NVU6 142 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 C11orf72Q8NBR9 251 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 RAB37Q96AX2 223 aa6.53□□□□□ -1.36
TMEM116-209ENST00000550020 CITED2Q99967 270 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-209ENST00000550020 SPANXB1Q9NS25 103 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-209ENST00000550020 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
TMEM116-209ENST00000550020 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 GAGE12BA1L429 117 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 K7ERU9 68 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 SAP30O75446 220 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 C12orf74Q32Q52 190 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 TMEM263Q8WUH6 116 aaKnown RBP6.52□□□□□ -1.37
TMEM116-209ENST00000550020 TIMM21Q9BVV7 248 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 ESM1Q9NQ30 184 aa6.52□□□□□ -1.37
TMEM116-209ENST00000550020 TACC2O95359 2948 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 J3QQQ9 107 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 P0DMU3 169 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 AZU1P20160 251 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 RPL36AP83881 106 aaKnown RBP6.51□□□□□ -1.37
TMEM116-209ENST00000550020 NDUFA11Q86Y39 141 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 RPL36ALQ969Q0 106 aaKnown RBP6.51□□□□□ -1.37
TMEM116-209ENST00000550020 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 ZNF479Q96JC4 524 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 XCL2Q9UBD3 114 aa6.51□□□□□ -1.37
TMEM116-209ENST00000550020 USP9XQ93008 2570 aaPredicted RBP6.5□□□□□ -1.37
TMEM116-209ENST00000550020 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 TMEM223A0PJW6 202 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 IGLL5B9A064 214 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 IGLV1-51P01701 117 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 MRPS36P82909 103 aaKnown RBP6.5□□□□□ -1.37
TMEM116-209ENST00000550020 DAZ2Q13117 558 aaKnown RBP6.5□□□□□ -1.37
TMEM116-209ENST00000550020 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
TMEM116-209ENST00000550020 IL17DQ8TAD2 202 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 AMELXQ99217 191 aa6.5□□□□□ -1.37
TMEM116-209ENST00000550020 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
TMEM116-209ENST00000550020 MRPL16Q9NX20 251 aaKnown RBP6.5□□□□□ -1.37
TMEM116-209ENST00000550020 SPTAN1Q13813 2472 aaKnown RBP6.49□□□□□ -1.37
TMEM116-209ENST00000550020 RELNP78509 3460 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 TRAV4A0A0B4J268 109 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 A0A0J9YY99 117 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 OCIAD2Q56VL3 154 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 C11orf44Q8N8P7 122 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 SLC25A29Q8N8R3 303 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 ZNRF2Q8NHG8 242 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 RNASE8Q8TDE3 154 aaKnown RBP6.49□□□□□ -1.37
TMEM116-209ENST00000550020 PHLDA1Q8WV24 401 aaPredicted RBP6.49□□□□□ -1.37
TMEM116-209ENST00000550020 CFAP46Q8IYW2 2715 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 ZNF462Q96JM2 2506 aa6.49□□□□□ -1.37
TMEM116-209ENST00000550020 UBR5O95071 2799 aaPredicted RBP6.49□□□□□ -1.37
TMEM116-209ENST00000550020 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
TMEM116-209ENST00000550020 F8W1H4 67 aa6.48□□□□□ -1.37
TMEM116-209ENST00000550020 ZNF22P17026 224 aaPredicted RBP6.48□□□□□ -1.37
TMEM116-209ENST00000550020 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
TMEM116-209ENST00000550020 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
TMEM116-209ENST00000550020 UBE2D4Q9Y2X8 147 aa6.48□□□□□ -1.37
TMEM116-209ENST00000550020 USP24Q9UPU5 2620 aa6.48□□□□□ -1.37
TMEM116-209ENST00000550020 SPG11Q96JI7 2443 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 MUC4Q99102 2169 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.47□□□□□ -1.37
TMEM116-209ENST00000550020 A0A0J9YXV3 536 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 K7EQD1 137 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 K7ERJ3 54 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 PF4P02776 101 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 INSL3P51460 131 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 EMP1P54849 157 aa6.47□□□□□ -1.37
TMEM116-209ENST00000550020 PROK1P58294 105 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms