RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HELZ2Q9BYK8 2649 aaKnown RBP8.31□□□□□ -1.08
LINC00661-204ENST00000549354 PRSS2P07478 247 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 LGALS1P09382 135 aaKnown RBP8.31□□□□□ -1.08
LINC00661-204ENST00000549354 SYNJ2BPP57105 145 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 RRN3P1Q2M238 152 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 MDFICQ9P1T7 246 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 ZNF469Q96JG9 3925 aaPredicted RBP8.31□□□□□ -1.08
LINC00661-204ENST00000549354 IGHV3-16A0A0C4DH30 117 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 PLNP26678 52 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 BAALCQ8WXS3 180 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 VPREB3Q9UKI3 123 aa8.31□□□□□ -1.08
LINC00661-204ENST00000549354 IGHV3-38A0A0C4DH36 116 aa8.3□□□□□ -1.08
LINC00661-204ENST00000549354 NDUFA4O00483 81 aa8.3□□□□□ -1.08
LINC00661-204ENST00000549354 PROK1P58294 105 aa8.3□□□□□ -1.08
LINC00661-204ENST00000549354 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
LINC00661-204ENST00000549354 PSMB8P28062 276 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 Q9UF83 564 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 J3QR89 54 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 APCP25054 2843 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 TRBV7-3A0A075B6L6 115 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 F8W1H4 67 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 Q1RN00 199 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 MORN3Q6PF18 240 aaPredicted RBP8.29□□□□□ -1.08
LINC00661-204ENST00000549354 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 SYT8Q8NBV8 401 aa8.29□□□□□ -1.08
LINC00661-204ENST00000549354 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 A8MZ25 164 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
LINC00661-204ENST00000549354 ORMDL2Q53FV1 153 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 C9orf47Q6ZRZ4 202 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 Q8N2B8 174 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 TEX29Q8N6K0 151 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 ZNF625Q96I27 306 aaPredicted RBP8.28□□□□□ -1.08
LINC00661-204ENST00000549354 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 TENM4Q6N022 2769 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 NEXN-AS1Q8NBZ9 246 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
LINC00661-204ENST00000549354 CLUHP3Q96NS8 147 aa8.28□□□□□ -1.08
LINC00661-204ENST00000549354 TRAV2A0A0B4J234 112 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 TRAV21A0A0B4J279 112 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 C18orf65Q6ZTR6 163 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 GPHB5Q86YW7 130 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 RNF152Q8N8N0 203 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 ZNF702PQ9H963 129 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 ATRQ13535 2644 aa8.27□□□□□ -1.09
LINC00661-204ENST00000549354 WFDC11Q8NEX6 87 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 SPXQ9BT56 116 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 TMEM86BQ8N661 226 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 LINC01546A6NGU7 62 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 DAND5Q8N907 189 aa8.26□□□□□ -1.09
LINC00661-204ENST00000549354 K7EMT4 169 aa8.25□□□□□ -1.09
LINC00661-204ENST00000549354 IGHV3-53P01767 116 aa8.25□□□□□ -1.09
LINC00661-204ENST00000549354 RNASE3P12724 160 aaKnown RBP8.25□□□□□ -1.09
LINC00661-204ENST00000549354 MRAP2Q96G30 205 aa8.25□□□□□ -1.09
LINC00661-204ENST00000549354 TSPAN13O95857 204 aa8.25□□□□□ -1.09
LINC00661-204ENST00000549354 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
LINC00661-204ENST00000549354 TSPEAR-AS2P59090 65 aa8.25□□□□□ -1.09
LINC00661-204ENST00000549354 SRSF2Q01130 221 aaKnown RBP8.25□□□□□ -1.09
LINC00661-204ENST00000549354 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
LINC00661-204ENST00000549354 ZNF876PQ49A33 203 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 CIDEAO60543 219 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 TSHBP01222 138 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 CRYGDP07320 174 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 ELANEP08246 267 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 CKS1BP61024 79 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 KRTAP1-1Q07627 177 aa8.24□□□□□ -1.09
LINC00661-204ENST00000549354 SUMO4Q6EEV6 95 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 APRG1Q8IVJ8 170 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 DLX4Q92988 240 aaPredicted RBP8.23□□□□□ -1.09
LINC00661-204ENST00000549354 UBE2E2Q96LR5 201 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 TEP1Q99973 2627 aaKnown RBP8.23□□□□□ -1.09
LINC00661-204ENST00000549354 SOCS3O14543 225 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 FOXI1Q12951 378 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 Q6ZSV7 163 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 Q8N1Y9 231 aa8.23□□□□□ -1.09
LINC00661-204ENST00000549354 PDZD2O15018 2839 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 A0A1B0GV72 72 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 TCL1BO95988 128 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 FHL3Q13643 280 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 TRAV8-3A0A0A6YYJ7 113 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 TAL2Q16559 108 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 TRPT1Q86TN4 253 aaKnown RBP8.22□□□□□ -1.09
LINC00661-204ENST00000549354 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
LINC00661-204ENST00000549354 DAZ1Q9NQZ3 744 aaKnown RBP8.22□□□□□ -1.09
LINC00661-204ENST00000549354 A0A0J9YXV3 536 aa8.21□□□□□ -1.09
LINC00661-204ENST00000549354 SLURP1P55000 103 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms