RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 DNAH2Q9P225 4427 aa12.06□□□□□ -0.48
RAPGEF3-220ENST00000549347 FRAS1Q86XX4 4008 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 A0A087WWC5 75 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 F8W036 122 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 DNAH10OSP0CZ25 163 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 RIGQ13278 110 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 RASL11AQ6T310 242 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 SEC11CQ9BY50 192 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
RAPGEF3-220ENST00000549347 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
RAPGEF3-220ENST00000549347 OR10J3Q5JRS4 329 aa12.04□□□□□ -0.48
RAPGEF3-220ENST00000549347 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
RAPGEF3-220ENST00000549347 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
RAPGEF3-220ENST00000549347 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
RAPGEF3-220ENST00000549347 K7EP13 123 aa12.03□□□□□ -0.48
RAPGEF3-220ENST00000549347 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
RAPGEF3-220ENST00000549347 FRZBQ92765 325 aa12.03□□□□□ -0.48
RAPGEF3-220ENST00000549347 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 LINC01556Q5JQF7 62 aa12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 C1orf134Q5TEV5 83 aa12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 DAZ4Q86SG3 579 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 GATD1Q8NB37 220 aa12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 NIT2Q9NQR4 276 aa12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 DAZ3Q9NR90 486 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 TNFRSF18Q9Y5U5 241 aa12.02□□□□□ -0.49
RAPGEF3-220ENST00000549347 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
RAPGEF3-220ENST00000549347 A0A1B0GW15 77 aa12.01□□□□□ -0.49
RAPGEF3-220ENST00000549347 RTL8CO15255 209 aa12.01□□□□□ -0.49
RAPGEF3-220ENST00000549347 C6orf223Q8N319 242 aa12.01□□□□□ -0.49
RAPGEF3-220ENST00000549347 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-220ENST00000549347 C10orf91Q5T1B1 145 aa12□□□□□ -0.49
RAPGEF3-220ENST00000549347 LINC00336Q6ZUF6 198 aa12□□□□□ -0.49
RAPGEF3-220ENST00000549347 RNF185Q96GF1 192 aa12□□□□□ -0.49
RAPGEF3-220ENST00000549347 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
RAPGEF3-220ENST00000549347 A0A1B0GXF2 115 aa11.99□□□□□ -0.49
RAPGEF3-220ENST00000549347 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
RAPGEF3-220ENST00000549347 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
RAPGEF3-220ENST00000549347 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
RAPGEF3-220ENST00000549347 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-220ENST00000549347 TRBV6-8A0A0A6YYG3 113 aa11.98□□□□□ -0.49
RAPGEF3-220ENST00000549347 RAB4AP20338 218 aa11.98□□□□□ -0.49
RAPGEF3-220ENST00000549347 HBBP68871 147 aa11.98□□□□□ -0.49
RAPGEF3-220ENST00000549347 ATP5L2Q7Z4Y8 100 aa11.98□□□□□ -0.49
RAPGEF3-220ENST00000549347 MRAP2Q96G30 205 aa11.98□□□□□ -0.49
RAPGEF3-220ENST00000549347 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
RAPGEF3-220ENST00000549347 DNAH17Q9UFH2 4485 aa11.97□□□□□ -0.49
RAPGEF3-220ENST00000549347 S100A8P05109 93 aa11.97□□□□□ -0.49
RAPGEF3-220ENST00000549347 MRPL54Q6P161 138 aaKnown RBP11.97□□□□□ -0.49
RAPGEF3-220ENST00000549347 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
RAPGEF3-220ENST00000549347 CAMPP49913 170 aa11.96□□□□□ -0.49
RAPGEF3-220ENST00000549347 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.49
RAPGEF3-220ENST00000549347 NIT1Q86X76 327 aa11.96□□□□□ -0.49
RAPGEF3-220ENST00000549347 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
RAPGEF3-220ENST00000549347 TRBV6-5A0A0K0K1A5 114 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 IGHV3-30P01768 117 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 IGHV3-33P01772 117 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 IGHV3-30-3P0DP02 117 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 IGHV3-30-5P0DP03 117 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 IMMP2LQ96T52 175 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
RAPGEF3-220ENST00000549347 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
RAPGEF3-220ENST00000549347 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
RAPGEF3-220ENST00000549347 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
RAPGEF3-220ENST00000549347 Q6ZRN7 208 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF3-220ENST00000549347 Q8N3U1 123 aa11.94□□□□□ -0.5
RAPGEF3-220ENST00000549347 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
RAPGEF3-220ENST00000549347 PRSS29PA6NIE9 313 aa11.93□□□□□ -0.5
RAPGEF3-220ENST00000549347 IBA57-AS1B1ANH7 110 aa11.93□□□□□ -0.5
RAPGEF3-220ENST00000549347 LAGE3Q14657 143 aa11.93□□□□□ -0.5
RAPGEF3-220ENST00000549347 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 RPS10P46783 165 aaKnown RBP11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 RHEBQ15382 184 aa11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 NFE4Q86UQ8 179 aa11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 BTF3L4Q96K17 158 aa11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 TMEM242Q9NWH2 141 aa11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 URGCP-MRPS24S4R325 110 aa11.92□□□□□ -0.5
RAPGEF3-220ENST00000549347 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
RAPGEF3-220ENST00000549347 NCR2O95944 276 aa11.91□□□□□ -0.5
RAPGEF3-220ENST00000549347 PKIAP61925 76 aa11.91□□□□□ -0.5
RAPGEF3-220ENST00000549347 COTL1Q14019 142 aa11.91□□□□□ -0.5
RAPGEF3-220ENST00000549347 NRACQ8N912 160 aa11.91□□□□□ -0.5
RAPGEF3-220ENST00000549347 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
RAPGEF3-220ENST00000549347 TRAV9-1A0A075B6T8 112 aa11.9□□□□□ -0.5
RAPGEF3-220ENST00000549347 A0A087WX48 190 aa11.9□□□□□ -0.5
RAPGEF3-220ENST00000549347 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.5
RAPGEF3-220ENST00000549347 PPP1R17O96001 155 aa11.9□□□□□ -0.5
RAPGEF3-220ENST00000549347 CHCHD5Q9BSY4 110 aa11.9□□□□□ -0.5
RAPGEF3-220ENST00000549347 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
RAPGEF3-220ENST00000549347 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
RAPGEF3-220ENST00000549347 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
RAPGEF3-220ENST00000549347 TNP2Q05952 138 aa11.89□□□□□ -0.51
RAPGEF3-220ENST00000549347 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
RAPGEF3-220ENST00000549347 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
RAPGEF3-220ENST00000549347 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
RAPGEF3-220ENST00000549347 AMTP48728 403 aa11.88□□□□□ -0.51
RAPGEF3-220ENST00000549347 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms