RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 KLK12Q9UKR0 248 aa12.35□□□□□ -0.43
CHMP1A-207ENST00000549328 XKRY2A2RUG3 117 aa12.34□□□□□ -0.43
CHMP1A-207ENST00000549328 SSTP61278 116 aa12.34□□□□□ -0.43
CHMP1A-207ENST00000549328 WFDC2Q14508 124 aa12.34□□□□□ -0.43
CHMP1A-207ENST00000549328 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
CHMP1A-207ENST00000549328 TRBV20OR9-2A0A075B6H5 130 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 RBFOX3A6NFN3 312 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 F2Z2F3 143 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 Q0VG73 95 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 TMEM97Q5BJF2 176 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 FRZBQ92765 325 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 UBE2WQ96B02 151 aa12.33□□□□□ -0.44
CHMP1A-207ENST00000549328 TMEM262E9PQX1 116 aa12.32□□□□□ -0.44
CHMP1A-207ENST00000549328 P01737 135 aa12.32□□□□□ -0.44
CHMP1A-207ENST00000549328 GZMBP10144 247 aa12.32□□□□□ -0.44
CHMP1A-207ENST00000549328 CACNG7P62955 275 aa12.32□□□□□ -0.44
CHMP1A-207ENST00000549328 ATRAIDQ6UW56 229 aa12.32□□□□□ -0.44
CHMP1A-207ENST00000549328 IGKV2D-24A0A075B6R9 120 aa12.31□□□□□ -0.44
CHMP1A-207ENST00000549328 PKIAP61925 76 aa12.31□□□□□ -0.44
CHMP1A-207ENST00000549328 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
CHMP1A-207ENST00000549328 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
CHMP1A-207ENST00000549328 LECT2O14960 151 aa12.3□□□□□ -0.44
CHMP1A-207ENST00000549328 AKAP14Q86UN6 197 aa12.3□□□□□ -0.44
CHMP1A-207ENST00000549328 Q8N976 141 aa12.3□□□□□ -0.44
CHMP1A-207ENST00000549328 DNAJC30Q96LL9 226 aa12.3□□□□□ -0.44
CHMP1A-207ENST00000549328 H7C1H1 209 aa12.29□□□□□ -0.44
CHMP1A-207ENST00000549328 Q5VSD8 79 aa12.29□□□□□ -0.44
CHMP1A-207ENST00000549328 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
CHMP1A-207ENST00000549328 M0QY20 66 aa12.28□□□□□ -0.44
CHMP1A-207ENST00000549328 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
CHMP1A-207ENST00000549328 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
CHMP1A-207ENST00000549328 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
CHMP1A-207ENST00000549328 SMR3BP02814 79 aaPredicted RBP12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 MPV17L2Q567V2 206 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 ENHOQ6UWT2 76 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 NUDT11Q96G61 164 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
CHMP1A-207ENST00000549328 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 FAM229AH3BQW9 127 aa12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 MGPP08493 103 aa12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 NTF3P20783 257 aa12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 BLOC1S1P78537 153 aa12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
CHMP1A-207ENST00000549328 FAT1Q14517 4588 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 TRBV25-1A0A075B6N4 114 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 CRPP02741 224 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 ANGP03950 147 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 IQCJQ1A5X6 159 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 SUMO4Q6EEV6 95 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 Q6ZSA8 131 aa12.25□□□□□ -0.45
CHMP1A-207ENST00000549328 TMEM250H0YL14 139 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 CTRLP40313 264 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 HAMPP81172 84 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 MIAQ16674 131 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 RASL11AQ6T310 242 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 OCC1Q8TAD7 63 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 DPH3P1Q9H4G8 78 aa12.24□□□□□ -0.45
CHMP1A-207ENST00000549328 ALKAL2Q6UX46 152 aa12.23□□□□□ -0.45
CHMP1A-207ENST00000549328 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
CHMP1A-207ENST00000549328 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-207ENST00000549328 PRR34Q9NV39 138 aa12.23□□□□□ -0.45
CHMP1A-207ENST00000549328 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
CHMP1A-207ENST00000549328 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
CHMP1A-207ENST00000549328 K7EN84 100 aa12.22□□□□□ -0.45
CHMP1A-207ENST00000549328 RBX1P62877 108 aa12.22□□□□□ -0.45
CHMP1A-207ENST00000549328 C14orf177Q52M58 125 aa12.22□□□□□ -0.45
CHMP1A-207ENST00000549328 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
CHMP1A-207ENST00000549328 RNASE7Q9H1E1 156 aaKnown RBP12.21□□□□□ -0.45
CHMP1A-207ENST00000549328 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
CHMP1A-207ENST00000549328 GAGE6Q13070 117 aa12.2□□□□□ -0.46
CHMP1A-207ENST00000549328 TWIST1Q15672 202 aa12.2□□□□□ -0.46
CHMP1A-207ENST00000549328 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
CHMP1A-207ENST00000549328 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
CHMP1A-207ENST00000549328 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
CHMP1A-207ENST00000549328 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
CHMP1A-207ENST00000549328 LINC00269Q8N2A0 174 aa12.18□□□□□ -0.46
CHMP1A-207ENST00000549328 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
CHMP1A-207ENST00000549328 FAM231DQ6ZW35 169 aa12.17□□□□□ -0.46
CHMP1A-207ENST00000549328 GTSF1Q8WW33 167 aa12.17□□□□□ -0.46
CHMP1A-207ENST00000549328 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
CHMP1A-207ENST00000549328 A8MWL6 223 aa12.16□□□□□ -0.46
CHMP1A-207ENST00000549328 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
CHMP1A-207ENST00000549328 USP17L23D6RBM5 183 aa12.15□□□□□ -0.46
CHMP1A-207ENST00000549328 HLA-DQA1P01909 254 aa12.15□□□□□ -0.46
CHMP1A-207ENST00000549328 COTL1Q14019 142 aa12.15□□□□□ -0.46
CHMP1A-207ENST00000549328 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
CHMP1A-207ENST00000549328 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
CHMP1A-207ENST00000549328 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
CHMP1A-207ENST00000549328 TRAV8-4A0A0B4J246 113 aa12.14□□□□□ -0.47
CHMP1A-207ENST00000549328 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
CHMP1A-207ENST00000549328 REG3AQ06141 175 aa12.14□□□□□ -0.47
CHMP1A-207ENST00000549328 CT83Q5H943 113 aa12.14□□□□□ -0.47
CHMP1A-207ENST00000549328 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
CHMP1A-207ENST00000549328 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms