RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.37
GATC-202ENST00000548171 CXCL1P09341 107 aa12.76□□□□□ -0.37
GATC-202ENST00000548171 FHITP49789 147 aa12.76□□□□□ -0.37
GATC-202ENST00000548171 RPL7L1Q6DKI1 246 aaKnown RBP12.76□□□□□ -0.37
GATC-202ENST00000548171 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
GATC-202ENST00000548171 OR10AG1Q8NH19 301 aa12.76□□□□□ -0.37
GATC-202ENST00000548171 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.75□□□□□ -0.37
GATC-202ENST00000548171 hDV102S1A0JD36 115 aa12.75□□□□□ -0.37
GATC-202ENST00000548171 F5H697 171 aa12.75□□□□□ -0.37
GATC-202ENST00000548171 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
GATC-202ENST00000548171 DERL1Q9BUN8 251 aa12.75□□□□□ -0.37
GATC-202ENST00000548171 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
GATC-202ENST00000548171 REG3AQ06141 175 aa12.74□□□□□ -0.37
GATC-202ENST00000548171 GAGE6Q13070 117 aa12.74□□□□□ -0.37
GATC-202ENST00000548171 AKR1C8PQ5T2L2 129 aa12.74□□□□□ -0.37
GATC-202ENST00000548171 SSBP4Q9BWG4 385 aaPredicted RBP12.74□□□□□ -0.37
GATC-202ENST00000548171 ALG5Q9Y673 324 aa12.74□□□□□ -0.37
GATC-202ENST00000548171 TRAV8-4A0A0B4J246 113 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 P01737 135 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 OR5AL1P0C617 328 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 AKR1C3P42330 323 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 IQCJQ1A5X6 159 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 AP5S1Q9NUS5 200 aa12.73□□□□□ -0.37
GATC-202ENST00000548171 A0A087WYN8 130 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 MAP1LC3B2A6NCE7 125 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 SNAI2O43623 268 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 SPANXN1Q5VSR9 72 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 CST9LP1Q5W188 147 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 STOML3Q8TAV4 291 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 MAP1LC3BQ9GZQ8 125 aa12.72□□□□□ -0.37
GATC-202ENST00000548171 IGLV10-54A0A075B6I4 117 aa12.71□□□□□ -0.37
GATC-202ENST00000548171 S100A9P06702 114 aaKnown RBP12.71□□□□□ -0.37
GATC-202ENST00000548171 SMIM17P0DL12 118 aa12.71□□□□□ -0.37
GATC-202ENST00000548171 GZMBP10144 247 aa12.71□□□□□ -0.37
GATC-202ENST00000548171 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
GATC-202ENST00000548171 MED28Q9H204 178 aa12.71□□□□□ -0.37
GATC-202ENST00000548171 IGHV1-24A0A0C4DH33 117 aa12.7□□□□□ -0.38
GATC-202ENST00000548171 C7orf33Q8WU49 177 aa12.7□□□□□ -0.38
GATC-202ENST00000548171 Q5BKY6 102 aa12.69□□□□□ -0.38
GATC-202ENST00000548171 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
GATC-202ENST00000548171 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
GATC-202ENST00000548171 GIPP09681 153 aaPredicted RBP12.68□□□□□ -0.38
GATC-202ENST00000548171 CHTF8P0CG12 524 aa12.68□□□□□ -0.38
GATC-202ENST00000548171 PLAC8Q9NZF1 115 aa12.68□□□□□ -0.38
GATC-202ENST00000548171 MUC21A0A0G2JKD1 596 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 MUC21A0A140T8X8 626 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 A0A1B0GUV1 79 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 H7C1H1 209 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 SLPIP03973 132 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 C20orf203Q8NBC4 194 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
GATC-202ENST00000548171 FXYD6-FXYD2A0A087WZ82 144 aa12.66□□□□□ -0.38
GATC-202ENST00000548171 PHOX2AO14813 284 aa12.66□□□□□ -0.38
GATC-202ENST00000548171 MLST8Q9BVC4 326 aa12.66□□□□□ -0.38
GATC-202ENST00000548171 PAGE4O60829 102 aa12.65□□□□□ -0.38
GATC-202ENST00000548171 BAGE2Q86Y30 109 aa12.65□□□□□ -0.38
GATC-202ENST00000548171 M0QY20 66 aa12.64□□□□□ -0.39
GATC-202ENST00000548171 SSTP61278 116 aa12.64□□□□□ -0.39
GATC-202ENST00000548171 TMEM243Q9BU79 118 aa12.64□□□□□ -0.39
GATC-202ENST00000548171 RNF213Q63HN8 5207 aa12.64□□□□□ -0.39
GATC-202ENST00000548171 LRP2P98164 4655 aa12.63□□□□□ -0.39
GATC-202ENST00000548171 WDR73Q6P4I2 378 aa12.63□□□□□ -0.39
GATC-202ENST00000548171 RAB5CP51148 216 aa12.62□□□□□ -0.39
GATC-202ENST00000548171 CFAP161Q6P656 301 aa12.62□□□□□ -0.39
GATC-202ENST00000548171 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
GATC-202ENST00000548171 MGPP08493 103 aa12.61□□□□□ -0.39
GATC-202ENST00000548171 SCO2A0A1W2PP80 73 aa12.6□□□□□ -0.39
GATC-202ENST00000548171 PFDN1O60925 122 aa12.6□□□□□ -0.39
GATC-202ENST00000548171 PRR3P79522 188 aaKnown RBP12.6□□□□□ -0.39
GATC-202ENST00000548171 COX6A2Q02221 97 aa12.6□□□□□ -0.39
GATC-202ENST00000548171 GTSF1Q8WW33 167 aa12.6□□□□□ -0.39
GATC-202ENST00000548171 PGLYRP4Q96LB8 373 aa12.6□□□□□ -0.39
GATC-202ENST00000548171 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
GATC-202ENST00000548171 NDUFS6O75380 124 aaKnown RBP12.59□□□□□ -0.39
GATC-202ENST00000548171 RPS10P46783 165 aaKnown RBP12.59□□□□□ -0.39
GATC-202ENST00000548171 SULT1A2P50226 295 aa12.59□□□□□ -0.39
GATC-202ENST00000548171 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
GATC-202ENST00000548171 CYTL1Q9NRR1 136 aa12.59□□□□□ -0.39
GATC-202ENST00000548171 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
GATC-202ENST00000548171 UBE2L6O14933 153 aa12.58□□□□□ -0.4
GATC-202ENST00000548171 NKX2-5P52952 324 aaPredicted RBP12.58□□□□□ -0.4
GATC-202ENST00000548171 C15orf56Q8N910 161 aa12.58□□□□□ -0.4
GATC-202ENST00000548171 CACNG7P62955 275 aa12.57□□□□□ -0.4
GATC-202ENST00000548171 MAJINQ3KP22 176 aa12.57□□□□□ -0.4
GATC-202ENST00000548171 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
GATC-202ENST00000548171 TMUB2Q71RG4 321 aa12.57□□□□□ -0.4
GATC-202ENST00000548171 SFT2D1Q8WV19 159 aa12.57□□□□□ -0.4
GATC-202ENST00000548171 MBD3L1Q8WWY6 194 aa12.57□□□□□ -0.4
GATC-202ENST00000548171 TNXBP22105 4242 aa12.56□□□□□ -0.4
GATC-202ENST00000548171 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
GATC-202ENST00000548171 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
GATC-202ENST00000548171 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
GATC-202ENST00000548171 IGKV2-24A0A0C4DH68 120 aa12.55□□□□□ -0.4
GATC-202ENST00000548171 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
GATC-202ENST00000548171 ARPC5O15511 151 aa12.55□□□□□ -0.4
GATC-202ENST00000548171 RPS20P60866 119 aaKnown RBP12.55□□□□□ -0.4
GATC-202ENST00000548171 REG3GQ6UW15 175 aa12.55□□□□□ -0.4
GATC-202ENST00000548171 SPINK6Q6UWN8 80 aa12.55□□□□□ -0.4
GATC-202ENST00000548171 STPG4Q8N801 248 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms