RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 RPL36ALQ969Q0 106 aaKnown RBP4.44□□□□□ -1.7
SCAF11-211ENST00000547950 DNAJC30Q96LL9 226 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 FAM30AQ9NZY2 134 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 TRBV7-3A0A075B6L6 115 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 IGKV2D-24A0A075B6R9 120 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 RBFOX3A6NFN3 312 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 F5H697 171 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 BCL2L11O43521 198 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 RAB4BP61018 213 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 UBE2D3P61077 147 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 UBE2D2P62837 147 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 CCL20P78556 96 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 ZNF345Q14585 488 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 ZNF56Q15929 161 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 SPANXN1Q5VSR9 72 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 OR10AG1Q8NH19 301 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 UBE2WQ96B02 151 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 RMI2Q96E14 147 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 TMEM70Q9BUB7 260 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 GNG13Q9P2W3 67 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
SCAF11-211ENST00000547950 TRBV10-1A0A0K0K1A3 114 aa4.42□□□□□ -1.7
SCAF11-211ENST00000547950 RPL35P42766 123 aaKnown RBP4.42□□□□□ -1.7
SCAF11-211ENST00000547950 EIF5AP63241 154 aaKnown RBP4.42□□□□□ -1.7
SCAF11-211ENST00000547950 ELOBQ15370 118 aa4.42□□□□□ -1.7
SCAF11-211ENST00000547950 Q8N976 141 aa4.42□□□□□ -1.7
SCAF11-211ENST00000547950 TPPP3Q9BW30 176 aa4.42□□□□□ -1.7
SCAF11-211ENST00000547950 TRBV6-8A0A0A6YYG3 113 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 SMIM17P0DL12 118 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 GZMBP10144 247 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 C15orf54Q8N8G6 183 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 OR10G8Q8NGN5 311 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 DAZAP1Q96EP5 407 aaKnown RBP4.41□□□□□ -1.7
SCAF11-211ENST00000547950 CHCHD5Q9BSY4 110 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 DERL1Q9BUN8 251 aa4.41□□□□□ -1.7
SCAF11-211ENST00000547950 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.7
SCAF11-211ENST00000547950 RAB19A4D1S5 217 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 SNAI2O43623 268 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 C1QBP02746 253 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 ANGP03950 147 aaKnown RBP4.4□□□□□ -1.71
SCAF11-211ENST00000547950 CXCL1P09341 107 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 OR5AL1P0C617 328 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 Q0VG73 95 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 ENHOQ6UWT2 76 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-211ENST00000547950 CHCHD7Q9BUK0 85 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 C1orf43Q9BWL3 253 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 MANBALQ9NQG1 85 aa4.4□□□□□ -1.71
SCAF11-211ENST00000547950 FAT1Q14517 4588 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 TEX46H3BTG2 121 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 IGLV2-8P01709 118 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 CRPP02741 224 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 MGPP08493 103 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 GNG4P50150 75 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 RAB5CP51148 216 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 GAGE6Q13070 117 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 CENPWQ5EE01 88 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 EIF5AL1Q6IS14 154 aaKnown RBP4.39□□□□□ -1.71
SCAF11-211ENST00000547950 NTM-AS1Q6ZSK4 140 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 OR2D3Q8NGH3 330 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 MED9Q9NWA0 146 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 KIF25-AS1Q9Y6Z4 181 aa4.39□□□□□ -1.71
SCAF11-211ENST00000547950 TRAV1-1A0A0B4J248 108 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 RPS20P60866 119 aaKnown RBP4.38□□□□□ -1.71
SCAF11-211ENST00000547950 TMEM97Q5BJF2 176 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 ATRAIDQ6UW56 229 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 CLPSL2Q6UWE3 100 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 Q6ZSA8 131 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 FER1L6-AS1Q8NA97 138 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 DEFB104AQ8WTQ1 72 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 C11orf52Q96A22 123 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 AP1S3Q96PC3 154 aa4.38□□□□□ -1.71
SCAF11-211ENST00000547950 TRBV25-1A0A075B6N4 114 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 XKRY2A2RUG3 117 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 C19orf71A6NCJ1 209 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 USP17L23D6RBM5 183 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 H7C1H1 209 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 M0QY20 66 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 PDE6DO43924 150 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 IFNA1P01562 189 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 P01737 135 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 IGLC6P0CF74 106 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 SULT1A2P50226 295 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 PKIAP61925 76 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 RBX1P62877 108 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 CACNG7P62955 275 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 MEF2BQ02080 365 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-211ENST00000547950 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 LYZL1Q6UWQ5 148 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 LINC00269Q8N2A0 174 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 CHAC1Q9BUX1 264 aa4.37□□□□□ -1.71
SCAF11-211ENST00000547950 TRBV20OR9-2A0A075B6H5 130 aa4.36□□□□□ -1.71
SCAF11-211ENST00000547950 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms