RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 LINC01587Q99440 93 aa8.02□□□□□ -1.12
NPAS3-205ENST00000547068 SPTAN1Q13813 2472 aaKnown RBP8.02□□□□□ -1.13
NPAS3-205ENST00000547068 FAM240AA0A1B0GVK7 77 aa8.02□□□□□ -1.13
NPAS3-205ENST00000547068 B9A039 149 aa8.02□□□□□ -1.13
NPAS3-205ENST00000547068 H3BT86 120 aa8.02□□□□□ -1.13
NPAS3-205ENST00000547068 RNASE3P12724 160 aaKnown RBP8.02□□□□□ -1.13
NPAS3-205ENST00000547068 POM121L12Q8N7R1 296 aa8.02□□□□□ -1.13
NPAS3-205ENST00000547068 CCDC140Q96MF4 163 aa8.02□□□□□ -1.13
NPAS3-205ENST00000547068 ABCA4P78363 2273 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 TRBV7-7A0A0K0K1E9 115 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 SDHAF1A6NFY7 115 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 F5H697 171 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 COX6CP09669 75 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 RNASE4P34096 147 aaKnown RBP8.01□□□□□ -1.13
NPAS3-205ENST00000547068 C9orf139Q6ZV77 190 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 FAM110DQ8TAY7 271 aaPredicted RBP8.01□□□□□ -1.13
NPAS3-205ENST00000547068 ICOSQ9Y6W8 199 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 ODF3BA8MYP8 253 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 LINC00315P59091 139 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 SUMO4Q6EEV6 95 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 Q8N6K4 173 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 OPRPNQ99935 248 aaPredicted RBP8.01□□□□□ -1.13
NPAS3-205ENST00000547068 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
NPAS3-205ENST00000547068 A0A0J9YXY3 114 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 UBE2E1P51965 193 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 TMEM101Q96IK0 257 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 MUC4Q99102 2169 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 PRSS2P07478 247 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
NPAS3-205ENST00000547068 ID1P41134 155 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 JPT2Q9H910 190 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 UBTD1Q9HAC8 227 aa8□□□□□ -1.13
NPAS3-205ENST00000547068 A0A0J9YX75 114 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 DEFB1P60022 68 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 ZNF256Q9Y2P7 627 aaPredicted RBP7.99□□□□□ -1.13
NPAS3-205ENST00000547068 U3KQE9 123 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 TRGV11A0A075B6L2 103 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 A0A087WWL8 130 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 IGHV1-69P01742 117 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 EBI3Q14213 229 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 DEFB121Q5J5C9 76 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 VMO1Q7Z5L0 202 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 Q8N9W7 124 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 CLEC2BQ92478 149 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 EEF1AKMT3Q96AZ1 226 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 ZNF580Q9UK33 172 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 LRRK2Q5S007 2527 aa7.99□□□□□ -1.13
NPAS3-205ENST00000547068 TRBV27A0A0K0K1C4 114 aa7.98□□□□□ -1.13
NPAS3-205ENST00000547068 OVOL1O14753 267 aa7.98□□□□□ -1.13
NPAS3-205ENST00000547068 ATP6V0E1O15342 81 aa7.98□□□□□ -1.13
NPAS3-205ENST00000547068 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
NPAS3-205ENST00000547068 NXPH4O95158 308 aa7.98□□□□□ -1.13
NPAS3-205ENST00000547068 LINC00694P0DN24 101 aa7.98□□□□□ -1.13
NPAS3-205ENST00000547068 M0R1W7 72 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 TRBV7-1A0A0A6YYK4 115 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 A0A1W2PPR1 153 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 G3V318 75 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 LST1O00453 97 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 NRGNQ92686 78 aa7.97□□□□□ -1.13
NPAS3-205ENST00000547068 DOPEY2Q9Y3R5 2298 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 F6UB75 175 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 IGHV3-30-3P0DP02 117 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 DNAJC30Q96LL9 226 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 LITAFQ99732 161 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 SPXQ9BT56 116 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 IMUPQ9GZP8 106 aa7.96□□□□□ -1.13
NPAS3-205ENST00000547068 FAM74A4Q5TZK3 123 aa7.96□□□□□ -1.14
NPAS3-205ENST00000547068 Q6ZSV7 163 aa7.96□□□□□ -1.14
NPAS3-205ENST00000547068 HELZ2Q9BYK8 2649 aaKnown RBP7.95□□□□□ -1.14
NPAS3-205ENST00000547068 TRAV8-3A0A0A6YYJ7 113 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 OOSP1A8MZH6 123 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 NPC2P61916 151 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 NSUN5P1Q3KNT7 163 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 CEMP1Q6PRD7 247 aaPredicted RBP7.95□□□□□ -1.14
NPAS3-205ENST00000547068 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 UTP20O75691 2785 aaKnown RBP7.95□□□□□ -1.14
NPAS3-205ENST00000547068 I3L3M4 83 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 LY6HO94772 140 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 NDUFA7O95182 113 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 RHOHQ15669 191 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 KLK9Q2XQG4 91 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 C11orf71Q6IPW1 123 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 KLK9Q9UKQ9 250 aa7.95□□□□□ -1.14
NPAS3-205ENST00000547068 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
NPAS3-205ENST00000547068 PRRC2AP48634 2157 aaKnown RBP7.94□□□□□ -1.14
NPAS3-205ENST00000547068 ACYP1P07311 99 aa7.94□□□□□ -1.14
NPAS3-205ENST00000547068 RPL11P62913 178 aaKnown RBP7.94□□□□□ -1.14
NPAS3-205ENST00000547068 APRG1Q8IVJ8 170 aa7.94□□□□□ -1.14
NPAS3-205ENST00000547068 CCL19Q99731 98 aa7.94□□□□□ -1.14
NPAS3-205ENST00000547068 SPANXDQ9BXN6 97 aa7.94□□□□□ -1.14
NPAS3-205ENST00000547068 SPANXCQ9NY87 97 aa7.94□□□□□ -1.14
NPAS3-205ENST00000547068 USP9YO00507 2555 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms