RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 CIDEAO60543 219 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 MGPP08493 103 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 RNF185Q96GF1 192 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 URGCP-MRPS24S4R325 110 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 LINC00694P0DN24 101 aa11.28□□□□□ -0.6
LIMS2-217ENST00000545738 CAMPP49913 170 aa11.28□□□□□ -0.6
LIMS2-217ENST00000545738 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
LIMS2-217ENST00000545738 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
LIMS2-217ENST00000545738 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
LIMS2-217ENST00000545738 RYR3Q15413 4870 aa11.27□□□□□ -0.6
LIMS2-217ENST00000545738 SMIM17P0DL12 118 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 SLAQ13239 276 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 RHOHQ15669 191 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 DNAH6Q9C0G6 4158 aa11.27□□□□□ -0.61
LIMS2-217ENST00000545738 F5H697 171 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 M0QY20 66 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 RIGQ13278 110 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 TMEM191AQ9H0A3 160 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 LINC00614P0C842 121 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 S100A2P29034 98 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 DDTP30046 118 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 NEXN-AS1Q8NBZ9 246 aa11.26□□□□□ -0.61
LIMS2-217ENST00000545738 GAGE12JA6NER3 117 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 COLCA2A8K830 154 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 HBBP68871 147 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 GAGE1Q13065 139 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 GAGE4Q13068 117 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 GAGE5Q13069 117 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 GAGE13Q4V321 117 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
LIMS2-217ENST00000545738 TCTAP57738 103 aa11.24□□□□□ -0.61
LIMS2-217ENST00000545738 ESRGQ1W209 222 aa11.24□□□□□ -0.61
LIMS2-217ENST00000545738 PRADC1Q9BSG0 188 aa11.24□□□□□ -0.61
LIMS2-217ENST00000545738 ATP5L2Q7Z4Y8 100 aa11.23□□□□□ -0.61
LIMS2-217ENST00000545738 BTF3L4Q96K17 158 aa11.23□□□□□ -0.61
LIMS2-217ENST00000545738 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
LIMS2-217ENST00000545738 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
LIMS2-217ENST00000545738 LINC00476Q8WZB0 136 aa11.23□□□□□ -0.61
LIMS2-217ENST00000545738 RPL39LQ96EH5 51 aaKnown RBP11.23□□□□□ -0.61
LIMS2-217ENST00000545738 LINC00588Q9Y4M8 146 aa11.23□□□□□ -0.61
LIMS2-217ENST00000545738 DNAH2Q9P225 4427 aa11.22□□□□□ -0.61
LIMS2-217ENST00000545738 SMKR1H3BMG3 65 aa11.22□□□□□ -0.61
LIMS2-217ENST00000545738 SRIP30626 198 aa11.22□□□□□ -0.61
LIMS2-217ENST00000545738 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
LIMS2-217ENST00000545738 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
LIMS2-217ENST00000545738 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
LIMS2-217ENST00000545738 CHTOPQ9Y3Y2 248 aaKnown RBP11.22□□□□□ -0.61
LIMS2-217ENST00000545738 TRBV10-1A0A0K0K1A3 114 aa11.21□□□□□ -0.61
LIMS2-217ENST00000545738 NCR2O95944 276 aa11.21□□□□□ -0.61
LIMS2-217ENST00000545738 ELOBQ15370 118 aa11.21□□□□□ -0.61
LIMS2-217ENST00000545738 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
LIMS2-217ENST00000545738 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
LIMS2-217ENST00000545738 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 A0A1B0GW15 77 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 UBE2D3P61077 147 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 UBE2D2P62837 147 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 KCNIP4Q6PIL6 250 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 LYPD5Q6UWN5 251 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 NEGR1Q7Z3B1 354 aa11.21□□□□□ -0.62
LIMS2-217ENST00000545738 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.62
LIMS2-217ENST00000545738 TRBV7-3A0A075B6L6 115 aa11.2□□□□□ -0.62
LIMS2-217ENST00000545738 RASL11AQ6T310 242 aa11.2□□□□□ -0.62
LIMS2-217ENST00000545738 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
LIMS2-217ENST00000545738 LGALS9CQ6DKI2 356 aa11.19□□□□□ -0.62
LIMS2-217ENST00000545738 TMEM136Q6ZRR5 245 aa11.19□□□□□ -0.62
LIMS2-217ENST00000545738 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
LIMS2-217ENST00000545738 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
LIMS2-217ENST00000545738 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
LIMS2-217ENST00000545738 NRACQ8N912 160 aa11.18□□□□□ -0.62
LIMS2-217ENST00000545738 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
LIMS2-217ENST00000545738 LY6G6CO95867 125 aa11.18□□□□□ -0.62
LIMS2-217ENST00000545738 RPL36AP83881 106 aaKnown RBP11.18□□□□□ -0.62
LIMS2-217ENST00000545738 RPL36ALQ969Q0 106 aaKnown RBP11.18□□□□□ -0.62
LIMS2-217ENST00000545738 LCE6AA0A183 80 aa11.16□□□□□ -0.62
LIMS2-217ENST00000545738 D6R8Y8 96 aa11.16□□□□□ -0.62
LIMS2-217ENST00000545738 H7C1H1 209 aa11.16□□□□□ -0.62
LIMS2-217ENST00000545738 MRAP2Q96G30 205 aa11.16□□□□□ -0.62
LIMS2-217ENST00000545738 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
LIMS2-217ENST00000545738 PYY3Q5JQD4 70 aa11.15□□□□□ -0.62
LIMS2-217ENST00000545738 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
LIMS2-217ENST00000545738 GTSF1LQ9H1H1 148 aa11.15□□□□□ -0.62
LIMS2-217ENST00000545738 TRBV24-1A0A075B6N3 115 aa11.15□□□□□ -0.63
LIMS2-217ENST00000545738 RAB5AP20339 215 aa11.15□□□□□ -0.63
LIMS2-217ENST00000545738 CCL18P55774 89 aa11.15□□□□□ -0.63
LIMS2-217ENST00000545738 WFDC10BQ8IUB3 73 aa11.15□□□□□ -0.63
LIMS2-217ENST00000545738 OR10J3Q5JRS4 329 aa11.14□□□□□ -0.63
LIMS2-217ENST00000545738 DNAJC30Q96LL9 226 aa11.14□□□□□ -0.63
LIMS2-217ENST00000545738 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
LIMS2-217ENST00000545738 TNFRSF18Q9Y5U5 241 aa11.14□□□□□ -0.63
LIMS2-217ENST00000545738 NPYP01303 97 aa11.13□□□□□ -0.63
LIMS2-217ENST00000545738 KIAA1644Q3SXP7 199 aa11.13□□□□□ -0.63
LIMS2-217ENST00000545738 UBE2DNLQ8IWF7 75 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms