RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
RDX-218ENST00000544551 TSSC4Q9Y5U2 329 aaPredicted RBP11.19□□□□□ -0.62
RDX-218ENST00000544551 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 IGLL5B9A064 214 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 RBX1P62877 108 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.18□□□□□ -0.62
RDX-218ENST00000544551 IGKV2-29A2NJV5 120 aaPredicted RBP11.18□□□□□ -0.62
RDX-218ENST00000544551 PROK1P58294 105 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 SIVA1O15304 175 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
RDX-218ENST00000544551 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
RDX-218ENST00000544551 PLEKHB2Q96CS7 222 aa11.17□□□□□ -0.62
RDX-218ENST00000544551 HHLA3Q9XRX5 114 aa11.17□□□□□ -0.62
RDX-218ENST00000544551 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
RDX-218ENST00000544551 J3QQQ9 107 aa11.16□□□□□ -0.62
RDX-218ENST00000544551 SAMD13Q5VXD3 122 aa11.16□□□□□ -0.62
RDX-218ENST00000544551 TRPT1Q86TN4 253 aaKnown RBP11.16□□□□□ -0.62
RDX-218ENST00000544551 PTH2Q96A98 100 aa11.16□□□□□ -0.62
RDX-218ENST00000544551 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
RDX-218ENST00000544551 UBE2L6O14933 153 aa11.15□□□□□ -0.62
RDX-218ENST00000544551 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
RDX-218ENST00000544551 PRORYQ9H606 182 aa11.14□□□□□ -0.63
RDX-218ENST00000544551 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
RDX-218ENST00000544551 NF1P21359 2839 aa11.14□□□□□ -0.63
RDX-218ENST00000544551 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
RDX-218ENST00000544551 ZNRF2Q8NHG8 242 aa11.14□□□□□ -0.63
RDX-218ENST00000544551 TOMM6Q96B49 74 aa11.14□□□□□ -0.63
RDX-218ENST00000544551 C9JAW5 83 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 I3L3M4 83 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 DSCR9P59020 149 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 DAND5Q8N907 189 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
RDX-218ENST00000544551 SIGMAR1Q99720 223 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 TIMM21Q9BVV7 248 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 MUC4Q99102 2169 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 HELZ2Q9BYK8 2649 aaKnown RBP11.13□□□□□ -0.63
RDX-218ENST00000544551 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 C11orf68Q9H3H3 251 aaKnown RBP11.13□□□□□ -0.63
RDX-218ENST00000544551 A0A0J9YX75 114 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
RDX-218ENST00000544551 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 GAGE4Q13068 117 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 GAGE5Q13069 117 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 NBEAL2Q6ZNJ1 2754 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 GPHB5Q86YW7 130 aa11.12□□□□□ -0.63
RDX-218ENST00000544551 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 U3KQE9 123 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 COX6CP09669 75 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 ZNF415Q09FC8 603 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 CNFNQ9BYD5 112 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 LINC01619G3V211 115 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 H3BUA1 57 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 GATA3P23771 443 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 FOXI2Q6ZQN5 318 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 A0A1B0GV72 72 aa11.11□□□□□ -0.63
RDX-218ENST00000544551 A8MWV9 139 aa11.1□□□□□ -0.63
RDX-218ENST00000544551 DEFB130BP0DP73 79 aa11.1□□□□□ -0.63
RDX-218ENST00000544551 DEFB130AP0DP74 79 aa11.1□□□□□ -0.63
RDX-218ENST00000544551 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
RDX-218ENST00000544551 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
RDX-218ENST00000544551 NEXN-AS1Q8NBZ9 246 aa11.09□□□□□ -0.63
RDX-218ENST00000544551 A4D1N5 150 aa11.09□□□□□ -0.63
RDX-218ENST00000544551 A8MZ25 164 aa11.09□□□□□ -0.63
RDX-218ENST00000544551 ELANEP08246 267 aa11.09□□□□□ -0.63
RDX-218ENST00000544551 FBN2P35556 2912 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 E9PLD3 99 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 GAGE7O76087 117 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 GAGE12FP0CL80 117 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 GAGE12GP0CL81 117 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 GAGE12IP0CL82 117 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
RDX-218ENST00000544551 HTN3P15516 51 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 HIGD1BQ9P298 99 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 ATRQ13535 2644 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 TMEM141Q96I45 108 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
RDX-218ENST00000544551 AZU1P20160 251 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 INSP01308 110 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 DCANP1Q8TF63 244 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 PF4P02776 101 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
RDX-218ENST00000544551 CHCHD5Q9BSY4 110 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 OR13C6PQ8NH95 151 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 PRO1854Q9UHT4 67 aa11.07□□□□□ -0.64
RDX-218ENST00000544551 IGLV2-18A0A075B6J9 118 aa11.06□□□□□ -0.64
RDX-218ENST00000544551 K7EMT4 169 aa11.06□□□□□ -0.64
RDX-218ENST00000544551 K7EQG2 157 aa11.06□□□□□ -0.64
RDX-218ENST00000544551 A0A096LPF7 62 aa11.06□□□□□ -0.64
RDX-218ENST00000544551 SPAG8Q99932 426 aaPredicted RBP11.06□□□□□ -0.64
RDX-218ENST00000544551 PSMB8P28062 276 aa11.06□□□□□ -0.64
RDX-218ENST00000544551 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
RDX-218ENST00000544551 GCN1Q92616 2671 aaKnown RBP11.05□□□□□ -0.64
RDX-218ENST00000544551 TRAV12-1A0A0B4J245 112 aa11.05□□□□□ -0.64
RDX-218ENST00000544551 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms