RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 C10orf82Q8WW14 230 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 ITFG2Q969R8 447 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 BTF3L4Q96K17 158 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 AMELYQ99218 206 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 C9orf16Q9BUW7 83 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 C20orf27Q9GZN8 174 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 TLNRD1Q9H1K6 362 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 NHP2Q9NX24 153 aaKnown RBP0.34□□□□□ -2.36
YBX3-214ENST00000544501 TVP23BQ9NYZ1 205 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 OPTCQ9UBM4 332 aa0.34□□□□□ -2.36
YBX3-214ENST00000544501 CHCHD2Q9Y6H1 151 aaPredicted RBP0.34□□□□□ -2.36
YBX3-214ENST00000544501 A0A087WTM6 91 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 C7orf71A4D174 169 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 OR2T8A6NH00 312 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 NPFFO15130 113 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 CCL25O15444 150 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 IGLV1-51P01701 117 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 MT2AP02795 61 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 TFF1P04155 84 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 MT1FP04733 61 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 AP3S2P59780 193 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 CCL8P80075 99 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 ASB16-AS1Q495Z4 193 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 BCL2L15Q5TBC7 163 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 Q8IYB0 196 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 OR11H6Q8NGC7 330 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 TEX47Q8TBZ9 253 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 GNPDA2Q8TDQ7 276 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 C4orf3Q8WVX3 66 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 LYSMD1Q96S90 227 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 SLC25A21Q9BQT8 299 aaPredicted RBP0.33□□□□□ -2.36
YBX3-214ENST00000544501 GGACTQ9BVM4 153 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 WFDC10AQ9H1F0 79 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 C14orf132Q9NPU4 83 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 TMEM14CQ9P0S9 112 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 PCTPQ9UKL6 214 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 ARL2BPQ9Y2Y0 163 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 DSPPQ9NZW4 1301 aa0.33□□□□□ -2.36
YBX3-214ENST00000544501 TRAV23DV6A0A075B6W5 121 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 DEFB131BA0A096LNP1 70 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 TRAV4A0A0B4J268 109 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 A0A0D9SFI3 127 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 TRBV6-4A0A1B0GX49 114 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 FAM159BA6NKW6 160 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 A6NN06 94 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 F8W1H4 67 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 H0YGG7 62 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 TMEM256-PLSCR3K7ERE1 68 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 TAX1BP3O14907 124 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 OR7C1O76099 320 aaPredicted RBP0.32□□□□□ -2.36
YBX3-214ENST00000544501 RNASE4P34096 147 aaKnown RBP0.32□□□□□ -2.36
YBX3-214ENST00000544501 BLCAPP62952 87 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 UBE2BP63146 152 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 HIST1H3AP68431 136 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 REEP5Q00765 189 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 PSG9Q00887 426 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 KLRD1Q13241 179 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 INSL4Q14641 139 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 SNCBQ16143 134 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 IAH1Q2TAA2 248 aaPredicted RBP0.32□□□□□ -2.36
YBX3-214ENST00000544501 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 VMO1Q7Z5L0 202 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 IFT20Q8IY31 132 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 C12orf45Q8N5I9 185 aaPredicted RBP0.32□□□□□ -2.36
YBX3-214ENST00000544501 Q8N6K4 173 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 MNS1Q8NEH6 495 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 OR4K15Q8NH41 348 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 CEP19Q96LK0 163 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 C2orf50Q96LR7 162 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 OR4C12Q96R67 309 aa0.32□□□□□ -2.36
YBX3-214ENST00000544501 NMNAT1Q9HAN9 279 aaPredicted RBP0.32□□□□□ -2.36
YBX3-214ENST00000544501 TRGV10A0A0A0MS01 117 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 ODAMA1E959 279 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 H3BRM9 83 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 K7ERJ3 54 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 DEFB4AO15263 64 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 HAND1O96004 215 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 DHFRP00374 187 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 IFNA7P01567 189 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 CXCL1P09341 107 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 SPINT3P49223 89 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 NCALDP61601 193 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 RRN3P1Q2M238 152 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 EIF5AL1Q6IS14 154 aaKnown RBP0.31□□□□□ -2.36
YBX3-214ENST00000544501 C2orf82Q6UX34 121 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 C4orf22Q6V702 233 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 COX6B2Q6YFQ2 88 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 GOLT1AQ6ZVE7 132 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 TEN1Q86WV5 123 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 MORN4Q8NDC4 146 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 OR10K1Q8NGX5 313 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 OR10X1Q8NGY0 326 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 ZHX1-C8orf76Q96EF9 292 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 ZNF714Q96N38 554 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 GPER1Q99527 375 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 NPCDR1Q9BY65 106 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 TMEM138Q9NPI0 162 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 ORMDL1Q9P0S3 153 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 SS18L2Q9UHA2 77 aa0.31□□□□□ -2.36
YBX3-214ENST00000544501 SLC22A13Q9Y226 551 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms