RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ODF3BA8MYP8 253 aa9.77□□□□□ -0.85
CHD4-211ENST00000544484 TNFRSF13BO14836 293 aaPredicted RBP9.76□□□□□ -0.85
CHD4-211ENST00000544484 WFDC11Q8NEX6 87 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 KIR2DL5BA0A0G2JN68 375 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 KIR2DL5BA0A0G2JPC4 375 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 ZNF80P51504 273 aaPredicted RBP9.76□□□□□ -0.85
CHD4-211ENST00000544484 KIR2DL5AQ8N109 375 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 DEFB125Q8N687 156 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 A4D1N5 150 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 CTRLP40313 264 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 HERV-K104P63124 156 aa9.76□□□□□ -0.85
CHD4-211ENST00000544484 F8W735 103 aaPredicted RBP9.75□□□□□ -0.85
CHD4-211ENST00000544484 BAALCQ8WXS3 180 aa9.75□□□□□ -0.85
CHD4-211ENST00000544484 SND1-IT1Q9HBX3 110 aa9.75□□□□□ -0.85
CHD4-211ENST00000544484 DOPEY1Q5JWR5 2465 aa9.75□□□□□ -0.85
CHD4-211ENST00000544484 BAALC-AS2P0C853 105 aa9.75□□□□□ -0.85
CHD4-211ENST00000544484 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
CHD4-211ENST00000544484 OPRPNQ99935 248 aaPredicted RBP9.75□□□□□ -0.85
CHD4-211ENST00000544484 LINC00322Q6ZN03 302 aaPredicted RBP9.75□□□□□ -0.85
CHD4-211ENST00000544484 LOXL1Q08397 574 aaPredicted RBP9.75□□□□□ -0.85
CHD4-211ENST00000544484 hADV29S1A0JD25 119 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 HIST2H2BDQ6DRA6 164 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 TMEM89A2RUT3 159 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 C19orf71A6NCJ1 209 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 VSIG2Q96IQ7 327 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 MAP6D1Q9H9H5 199 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 CEMP1Q6PRD7 247 aaPredicted RBP9.74□□□□□ -0.85
CHD4-211ENST00000544484 C15orf53Q8NAA6 179 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 TP53TG3Q9ULZ0 132 aa9.74□□□□□ -0.85
CHD4-211ENST00000544484 TLN1Q9Y490 2541 aaKnown RBP9.74□□□□□ -0.85
CHD4-211ENST00000544484 ZNF295-AS1Q8N0V1 137 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 LINC00574Q9H8X3 128 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 KLK12Q9UKR0 248 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 P0DMU3 169 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 FAM231AP0DMU4 169 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 FAM231CP0DMU5 169 aa9.73□□□□□ -0.85
CHD4-211ENST00000544484 GAGE12HA6NDE8 117 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 CRYBA4P53673 196 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 FXYD2P54710 66 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 ALPK3Q96L96 1907 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 C11orf86A6NJI1 115 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 IGLL5B9A064 214 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 SMAD5-AS1Q9Y6J3 95 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 IGHV4-31P0DP07 118 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 TNRC6AQ8NDV7 1962 aaKnown RBP9.72□□□□□ -0.85
CHD4-211ENST00000544484 ETDCA0A1B0GVM5 59 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 ORMDL1Q9P0S3 153 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
CHD4-211ENST00000544484 KIAA1549Q9HCM3 1950 aa9.71□□□□□ -0.85
CHD4-211ENST00000544484 C10orf99Q6UWK7 81 aa9.71□□□□□ -0.86
CHD4-211ENST00000544484 IGF1P05019 195 aa9.71□□□□□ -0.86
CHD4-211ENST00000544484 ANKRD29Q8N6D5 301 aa9.7□□□□□ -0.86
CHD4-211ENST00000544484 TMEM263Q8WUH6 116 aaKnown RBP9.7□□□□□ -0.86
CHD4-211ENST00000544484 IGLV2-8P01709 118 aa9.7□□□□□ -0.86
CHD4-211ENST00000544484 MED14OSP0DP75 135 aa9.7□□□□□ -0.86
CHD4-211ENST00000544484 IFITM1P13164 125 aa9.7□□□□□ -0.86
CHD4-211ENST00000544484 IGHV4-28A0A0C4DH34 117 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 NCR3O14931 201 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 Q6ZTI0 123 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 TIMM17AQ99595 171 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 ARHGAP32A7KAX9 2087 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 TRBV6-1A0A0K0K1D8 114 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 ODF1Q14990 250 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 Q6YL49 198 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 TIRAPP58753 221 aa9.69□□□□□ -0.86
CHD4-211ENST00000544484 INAFM1C9JVW0 142 aa9.68□□□□□ -0.86
CHD4-211ENST00000544484 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
CHD4-211ENST00000544484 CENPFP49454 3210 aa9.68□□□□□ -0.86
CHD4-211ENST00000544484 EIF4EBP1Q13541 118 aaPredicted RBP9.68□□□□□ -0.86
CHD4-211ENST00000544484 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
CHD4-211ENST00000544484 E9PLD3 99 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 C20orf173Q96LM9 149 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 COL4A4P53420 1690 aaPredicted RBP9.67□□□□□ -0.86
CHD4-211ENST00000544484 NDUFA1O15239 70 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 GDF5OSQ5U4N7 250 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 Q6ZUT4 128 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 CEP192Q8TEP8 1941 aa9.67□□□□□ -0.86
CHD4-211ENST00000544484 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
CHD4-211ENST00000544484 NDUFS5O43920 106 aa9.66□□□□□ -0.86
CHD4-211ENST00000544484 NUP210LQ5VU65 1888 aa9.66□□□□□ -0.86
CHD4-211ENST00000544484 TRACP01848 142 aa9.66□□□□□ -0.86
CHD4-211ENST00000544484 CRYGBP07316 175 aa9.66□□□□□ -0.86
CHD4-211ENST00000544484 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
CHD4-211ENST00000544484 INSL3P51460 131 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 K7EQG2 157 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 C11orf71Q6IPW1 123 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 LY6LH3BQJ8 138 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 LRRC75A-AS1Q8N1F1 130 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 ZNF843Q8N446 348 aa9.65□□□□□ -0.86
CHD4-211ENST00000544484 DEFB114Q30KQ6 69 aa9.65□□□□□ -0.87
CHD4-211ENST00000544484 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.87
CHD4-211ENST00000544484 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.87
CHD4-211ENST00000544484 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
CHD4-211ENST00000544484 WFDC2Q14508 124 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 402.8 ms