RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 FAM231AP0DMU4 169 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 FAM231CP0DMU5 169 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 C20orf203Q8NBC4 194 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 DYNLRB2Q8TF09 96 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 TMEM238LA0A1B0GVL6 79 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 M0R2P5 195 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 C12orf74Q32Q52 190 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 A8MWV9 139 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 DUX3Q96PT4 197 aa12.97□□□□□ -0.33
SCARB1-208ENST00000544327 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.33
SCARB1-208ENST00000544327 DOPEY2Q9Y3R5 2298 aa12.96□□□□□ -0.34
SCARB1-208ENST00000544327 TRAV25A0A0B4J276 109 aa12.95□□□□□ -0.34
SCARB1-208ENST00000544327 IGLL5B9A064 214 aa12.95□□□□□ -0.34
SCARB1-208ENST00000544327 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-208ENST00000544327 KHDC1LQ5JSQ8 128 aa12.95□□□□□ -0.34
SCARB1-208ENST00000544327 CSMD2Q7Z408 3487 aa12.95□□□□□ -0.34
SCARB1-208ENST00000544327 DNAJC9-AS1A6NH13 148 aa12.95□□□□□ -0.34
SCARB1-208ENST00000544327 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
SCARB1-208ENST00000544327 FHL3Q13643 280 aa12.94□□□□□ -0.34
SCARB1-208ENST00000544327 COTL1Q14019 142 aa12.94□□□□□ -0.34
SCARB1-208ENST00000544327 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
SCARB1-208ENST00000544327 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
SCARB1-208ENST00000544327 RAX2Q96IS3 184 aa12.94□□□□□ -0.34
SCARB1-208ENST00000544327 MAP1AP78559 2803 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-208ENST00000544327 ZANQ9Y493 2812 aa12.93□□□□□ -0.34
SCARB1-208ENST00000544327 SCGB2A2Q13296 93 aa12.93□□□□□ -0.34
SCARB1-208ENST00000544327 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
SCARB1-208ENST00000544327 PYGO1Q9Y3Y4 419 aa12.93□□□□□ -0.34
SCARB1-208ENST00000544327 POLQO75417 2590 aa12.93□□□□□ -0.34
SCARB1-208ENST00000544327 INSP01308 110 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 C11orf72Q8NBR9 251 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 PLEKHB2Q96CS7 222 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 SPXQ9BT56 116 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 CRYBA4P53673 196 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 EMP1P54849 157 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 BEAN1Q3B7T3 259 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 PTPN13Q12923 2485 aa12.92□□□□□ -0.34
SCARB1-208ENST00000544327 LRRK2Q5S007 2527 aa12.91□□□□□ -0.34
SCARB1-208ENST00000544327 IGLV4-3A0A075B6K6 122 aa12.91□□□□□ -0.34
SCARB1-208ENST00000544327 RHODO00212 210 aa12.91□□□□□ -0.34
SCARB1-208ENST00000544327 SCGB1D4Q6XE38 83 aa12.91□□□□□ -0.34
SCARB1-208ENST00000544327 SPANXB1Q9NS25 103 aaPredicted RBP12.91□□□□□ -0.34
SCARB1-208ENST00000544327 ZFYVE26Q68DK2 2539 aa12.91□□□□□ -0.34
SCARB1-208ENST00000544327 A0A0J9YY99 117 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 A6NJY4 79 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 K7ERU9 68 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 HTN1P15515 57 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 ZNF479Q96JC4 524 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 CFAP126Q5VTH2 177 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 AMELXQ99217 191 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 LINC01587Q99440 93 aa12.9□□□□□ -0.34
SCARB1-208ENST00000544327 MXRA5Q9NR99 2828 aa12.89□□□□□ -0.35
SCARB1-208ENST00000544327 NAV2Q8IVL1 2488 aa12.89□□□□□ -0.35
SCARB1-208ENST00000544327 TMEM223A0PJW6 202 aa12.89□□□□□ -0.35
SCARB1-208ENST00000544327 OPRPNQ99935 248 aaPredicted RBP12.89□□□□□ -0.35
SCARB1-208ENST00000544327 ESM1Q9NQ30 184 aa12.89□□□□□ -0.35
SCARB1-208ENST00000544327 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
SCARB1-208ENST00000544327 UBE2D1P51668 147 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 PROK1P58294 105 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 DNAJC30Q96LL9 226 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 LEPROTO15243 131 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 RS1O15537 224 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 VCX2Q9H322 139 aa12.88□□□□□ -0.35
SCARB1-208ENST00000544327 CREBBPQ92793 2442 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 J3QQQ9 107 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 IGHV3-53P01767 116 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 PRM2P04554 102 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 ZNF22P17026 224 aaPredicted RBP12.87□□□□□ -0.35
SCARB1-208ENST00000544327 SORL1Q92673 2214 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 NACAE9PAV3 2078 aa12.87□□□□□ -0.35
SCARB1-208ENST00000544327 CCL24O00175 119 aa12.86□□□□□ -0.35
SCARB1-208ENST00000544327 CD28P10747 220 aa12.86□□□□□ -0.35
SCARB1-208ENST00000544327 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
SCARB1-208ENST00000544327 SRSF9Q13242 221 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCARB1-208ENST00000544327 Q6ZSN1 163 aa12.86□□□□□ -0.35
SCARB1-208ENST00000544327 SLC25A29Q8N8R3 303 aa12.86□□□□□ -0.35
SCARB1-208ENST00000544327 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
SCARB1-208ENST00000544327 IL17DQ8TAD2 202 aa12.85□□□□□ -0.35
SCARB1-208ENST00000544327 C16orf95Q9H693 158 aa12.85□□□□□ -0.35
SCARB1-208ENST00000544327 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
SCARB1-208ENST00000544327 RNF151Q2KHN1 245 aa12.85□□□□□ -0.35
SCARB1-208ENST00000544327 CHCHD7Q9BUK0 85 aa12.84□□□□□ -0.35
SCARB1-208ENST00000544327 SPANXA1Q9NS26 97 aa12.84□□□□□ -0.35
SCARB1-208ENST00000544327 A0A0J9YXV3 536 aa12.83□□□□□ -0.35
SCARB1-208ENST00000544327 IGHV3-30P01768 117 aa12.83□□□□□ -0.35
SCARB1-208ENST00000544327 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.35
SCARB1-208ENST00000544327 MRPS36P82909 103 aaKnown RBP12.83□□□□□ -0.35
SCARB1-208ENST00000544327 HIST2H2BDQ6DRA6 164 aa12.83□□□□□ -0.35
SCARB1-208ENST00000544327 STHQ8IWL8 128 aa12.83□□□□□ -0.35
SCARB1-208ENST00000544327 MRPL16Q9NX20 251 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms