RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PKDREJQ9NTG1 2253 aa11.79□□□□□ -0.52
CHD4-210ENST00000544040 A0A0J9YXY3 114 aa11.78□□□□□ -0.52
CHD4-210ENST00000544040 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
CHD4-210ENST00000544040 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
CHD4-210ENST00000544040 C20orf203Q8NBC4 194 aa11.78□□□□□ -0.52
CHD4-210ENST00000544040 SLX1AQ9BQ83 275 aa11.78□□□□□ -0.52
CHD4-210ENST00000544040 WT1P19544 449 aaPredicted RBP11.78□□□□□ -0.52
CHD4-210ENST00000544040 WFDC10BQ8IUB3 73 aa11.78□□□□□ -0.52
CHD4-210ENST00000544040 FAM236DA0A1B0GTK5 79 aa11.77□□□□□ -0.52
CHD4-210ENST00000544040 FAM236CP0DP71 79 aa11.77□□□□□ -0.52
CHD4-210ENST00000544040 C3orf22Q8N5N4 141 aa11.77□□□□□ -0.52
CHD4-210ENST00000544040 ZFP36P26651 326 aaKnown RBP11.77□□□□□ -0.53
CHD4-210ENST00000544040 ZNF407Q9C0G0 2248 aa11.77□□□□□ -0.53
CHD4-210ENST00000544040 LINC00269Q8N2A0 174 aa11.77□□□□□ -0.53
CHD4-210ENST00000544040 RLFQ13129 1914 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 SIP14410 1827 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 IGLV2-14P01704 120 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 MED14OSP0DP75 135 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
CHD4-210ENST00000544040 NACAE9PAV3 2078 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 PLXNA4Q9HCM2 1894 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 TSC2P49815 1807 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 NCKAP5O14513 1909 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
CHD4-210ENST00000544040 ODF3L1Q8IXM7 274 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 KRTAP27-1Q3LI81 207 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 PLA2G2CQ5R387 149 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 HIST2H2BDQ6DRA6 164 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 Q8N7P7 452 aa11.75□□□□□ -0.53
CHD4-210ENST00000544040 LTBP1Q14766 1721 aa11.74□□□□□ -0.53
CHD4-210ENST00000544040 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
CHD4-210ENST00000544040 C19orf71A6NCJ1 209 aa11.74□□□□□ -0.53
CHD4-210ENST00000544040 FNDC1Q4ZHG4 1894 aaPredicted RBP11.73□□□□□ -0.53
CHD4-210ENST00000544040 CACNA1BQ00975 2339 aa11.73□□□□□ -0.53
CHD4-210ENST00000544040 ZFAND2AQ8N6M9 145 aa11.73□□□□□ -0.53
CHD4-210ENST00000544040 PDE6GP18545 87 aa11.73□□□□□ -0.53
CHD4-210ENST00000544040 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
CHD4-210ENST00000544040 FAM19A1Q7Z5A9 133 aa11.73□□□□□ -0.53
CHD4-210ENST00000544040 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
CHD4-210ENST00000544040 TNRC6AQ8NDV7 1962 aaKnown RBP11.72□□□□□ -0.53
CHD4-210ENST00000544040 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
CHD4-210ENST00000544040 K7EMT4 169 aa11.72□□□□□ -0.53
CHD4-210ENST00000544040 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
CHD4-210ENST00000544040 GPHB5Q86YW7 130 aa11.72□□□□□ -0.53
CHD4-210ENST00000544040 DCANP1Q8TF63 244 aa11.72□□□□□ -0.53
CHD4-210ENST00000544040 A0A0J9YX75 114 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 UQCRQO14949 82 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 REG3AQ06141 175 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 PRO0255Q9UI72 69 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 NDUFC2-KCTD14E9PQ53 114 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 LINC00467Q9BRT7 94 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 CACNA1GO43497 2377 aa11.71□□□□□ -0.53
CHD4-210ENST00000544040 FAM240AA0A1B0GVK7 77 aa11.71□□□□□ -0.54
CHD4-210ENST00000544040 Q6ZTI0 123 aa11.71□□□□□ -0.54
CHD4-210ENST00000544040 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
CHD4-210ENST00000544040 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
CHD4-210ENST00000544040 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
CHD4-210ENST00000544040 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
CHD4-210ENST00000544040 IGKV1D-37A0A075B6S9 117 aa11.69□□□□□ -0.54
CHD4-210ENST00000544040 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
CHD4-210ENST00000544040 KLK5Q9Y337 293 aaPredicted RBP11.69□□□□□ -0.54
CHD4-210ENST00000544040 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
CHD4-210ENST00000544040 CHCHD10Q8WYQ3 142 aaPredicted RBP11.68□□□□□ -0.54
CHD4-210ENST00000544040 PLXNA2O75051 1894 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 A0A087WZ39 114 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 UFSP1Q6NVU6 142 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 MYCNOSP40205 109 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
CHD4-210ENST00000544040 FAM19A5Q7Z5A7 132 aaPredicted RBP11.67□□□□□ -0.54
CHD4-210ENST00000544040 CNOT1A5YKK6 2376 aaKnown RBP11.67□□□□□ -0.54
CHD4-210ENST00000544040 PRR4Q16378 134 aa11.67□□□□□ -0.54
CHD4-210ENST00000544040 CDKN2A-AS1Q9UH64 79 aa11.67□□□□□ -0.54
CHD4-210ENST00000544040 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
CHD4-210ENST00000544040 TRIAP1O43715 76 aa11.67□□□□□ -0.54
CHD4-210ENST00000544040 A0A1B0GXF2 115 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 C1orf158Q8N1D5 194 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 MAPKAPK5-AS1Q8N8E1 139 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 LINC01548A6NM66 108 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 NEXN-AS1Q8NBZ9 246 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 K7ERS5 55 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
CHD4-210ENST00000544040 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 IGF1P05019 195 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 PIP4P1Q86T03 277 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 C11orf45Q8TAV5 145 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 HRCT1Q6UXD1 115 aa11.65□□□□□ -0.54
CHD4-210ENST00000544040 ARHGAP21Q5T5U3 1957 aa11.65□□□□□ -0.55
CHD4-210ENST00000544040 V9GYY9 64 aa11.64□□□□□ -0.55
CHD4-210ENST00000544040 CRYGDP07320 174 aa11.64□□□□□ -0.55
CHD4-210ENST00000544040 C20orf173Q96LM9 149 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 357.9 ms