RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 FAM222AQ5U5X8 452 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 C20orf173Q96LM9 149 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 IGHV3-49A0A0A0MS15 119 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 M0QY20 66 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 SDIM1Q6ZPB5 146 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 C5orf38Q86SI9 138 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 DCANP1Q8TF63 244 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 EDA2RQ9HAV5 297 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 LAMA2P24043 3122 aaKnown RBP3.72□□□□□ -1.81
LMO3-229ENST00000543721 F8WDY8 70 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 H3BUA1 57 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 CD28P10747 220 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 ZNF415Q09FC8 603 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 USMG5Q96IX5 58 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 C9orf85Q96MD7 179 aa3.72□□□□□ -1.81
LMO3-229ENST00000543721 LYNX1G3V0Z9 82 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 IGF1P05019 195 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 LYNX1P0DP58 116 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 TMEM258P61165 79 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 CLEC2BQ92478 149 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 VSIG2Q96IQ7 327 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 PIMREGQ9BSJ6 248 aa3.71□□□□□ -1.81
LMO3-229ENST00000543721 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
LMO3-229ENST00000543721 A0A087WWL8 130 aa3.71□□□□□ -1.82
LMO3-229ENST00000543721 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.71□□□□□ -1.82
LMO3-229ENST00000543721 LINC00527Q9UJ94 153 aa3.71□□□□□ -1.82
LMO3-229ENST00000543721 TRAV41A0A0B4J266 112 aa3.71□□□□□ -1.82
LMO3-229ENST00000543721 NOTCH2Q04721 2471 aa3.71□□□□□ -1.82
LMO3-229ENST00000543721 NDUFA1O15239 70 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 RPL11P62913 178 aaKnown RBP3.7□□□□□ -1.82
LMO3-229ENST00000543721 UBTD1Q9HAC8 227 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 MYO18BQ8IUG5 2567 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 IGHV3-16A0A0C4DH30 117 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 TIRAPP58753 221 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 FAM74A4Q5TZK3 123 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 FAM19A5Q7Z5A7 132 aaPredicted RBP3.7□□□□□ -1.82
LMO3-229ENST00000543721 C1orf43Q9BWL3 253 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 LAMA3Q16787 3333 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 SPRY2O43597 315 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 BAALC-AS2P0C853 105 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 PRORYQ9H606 182 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 ZNF318Q5VUA4 2279 aa3.7□□□□□ -1.82
LMO3-229ENST00000543721 G3V318 75 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 K7EMT4 169 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 HIST1H4AP62805 103 aaKnown RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 ADAMTSL4-AS1Q5T5F5 129 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 SIRPDQ9H106 197 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 MOB4Q9Y3A3 225 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 IGHV1OR15-1A0A075B7D0 117 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 PIK3CD-AS1Q5SR53 167 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 JPT2Q9H910 190 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 RPL18AQ02543 176 aaKnown RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 DAZ2Q13117 558 aaKnown RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 DAZ4Q86SG3 579 aaKnown RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 C5orf56Q8N8D9 126 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 DUX5Q96PT3 197 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 RHPN1-AS1Q9BWJ2 59 aa3.69□□□□□ -1.82
LMO3-229ENST00000543721 DAZ1Q9NQZ3 744 aaKnown RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
LMO3-229ENST00000543721 TRAV12-3A0A0B4J271 114 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 TRAV25A0A0B4J276 109 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 S100A7L2Q5SY68 101 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 Q6JHZ5 121 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 C3orf56Q8N813 242 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 LINC00308Q8TCZ7 52 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 TECTAO75443 2155 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 ZFHX2Q9C0A1 2572 aaPredicted RBP3.68□□□□□ -1.82
LMO3-229ENST00000543721 TRAV13-2A0A0B4J235 113 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 NDUFC2-KCTD14E9PQ53 114 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 DNAL4O96015 105 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 FBXL19-AS1Q494R0 122 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 C19orf54Q5BKX5 351 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 CEMP1Q6PRD7 247 aaPredicted RBP3.68□□□□□ -1.82
LMO3-229ENST00000543721 C2orf48Q96LS8 159 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 PRRC2AP48634 2157 aaKnown RBP3.68□□□□□ -1.82
LMO3-229ENST00000543721 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
LMO3-229ENST00000543721 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
LMO3-229ENST00000543721 REV3LO60673 3130 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 MUC4Q99102 2169 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 F6UB75 175 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 ATP5J2P56134 94 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
LMO3-229ENST00000543721 H0YGX0 51 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 MALP21145 153 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 SAA4P35542 130 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 UNQ9165/PRO28630Q6UXU0 137 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 SMCR5Q8TEV8 140 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 WNK2Q9Y3S1 2297 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 ARHGAP32A7KAX9 2087 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 XIRP2A4UGR9 3374 aa3.67□□□□□ -1.82
LMO3-229ENST00000543721 LOC107984640A0A0U1RRK4 108 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 HIST2H2BCQ6DN03 193 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 HIST2H2BDQ6DRA6 164 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 DGAT2L7PQ6IED9 249 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 PRIMA1Q86XR5 153 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 NPC2P61916 151 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms