RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 Q6ZR03 302 aa15.06■□□□□ 0
HDAC4-215ENST00000543185 C4orf48Q5BLP8 95 aa15.05■□□□□ 0
HDAC4-215ENST00000543185 BPY2O14599 106 aa15.05■□□□□ -0
HDAC4-215ENST00000543185 KIR2DL5BQ8NHK3 375 aa15.05■□□□□ -0
HDAC4-215ENST00000543185 TM2D2Q9BX73 214 aa15.05■□□□□ -0
HDAC4-215ENST00000543185 USP17L23D6RBM5 183 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 GNLYP22749 145 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 MRPS36P82909 103 aaKnown RBP15.04■□□□□ -0
HDAC4-215ENST00000543185 P0DMU3 169 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 FAM231AP0DMU4 169 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 FAM231CP0DMU5 169 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 TEX49A0A1B0GTD5 131 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 H7C423 109 aa15.04■□□□□ -0
HDAC4-215ENST00000543185 LY6DQ14210 128 aa15.03■□□□□ -0
HDAC4-215ENST00000543185 FAM110AQ9BQ89 295 aa15.03■□□□□ -0
HDAC4-215ENST00000543185 SEM1Q6ZVN7 128 aa15.02■□□□□ -0
HDAC4-215ENST00000543185 C5orf38Q86SI9 138 aa15.02■□□□□ -0
HDAC4-215ENST00000543185 IGHV4-4A0A075B6R2 117 aa15.02■□□□□ -0
HDAC4-215ENST00000543185 RNF183Q96D59 192 aa15.02■□□□□ -0
HDAC4-215ENST00000543185 C20orf173Q96LM9 149 aa15.02■□□□□ -0
HDAC4-215ENST00000543185 IGLV11-55A0A075B6I3 123 aa15.02□□□□□ -0.01
HDAC4-215ENST00000543185 A0A0J9YXY3 114 aa15.02□□□□□ -0.01
HDAC4-215ENST00000543185 TRAV23DV6A0A075B6W5 121 aa15.02□□□□□ -0.01
HDAC4-215ENST00000543185 I3L2K1 104 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 IGKV4-1P06312 121 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 UBE2AP49459 152 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 A0A0J9YXV3 536 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 COX7BP24311 80 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 FAM167A-AS1Q96KT0 104 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 UNQ6494/PRO21346Q6UXR6 183 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 IGKV1OR2-108A0A075B7D4 117 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 SPART-AS1P0CW21 52 aa15.01□□□□□ -0.01
HDAC4-215ENST00000543185 FN1P02751 2386 aaKnown RBP15.01□□□□□ -0.01
HDAC4-215ENST00000543185 TRBV10-1A0A0K0K1A3 114 aa15□□□□□ -0.01
HDAC4-215ENST00000543185 TMEM105Q8N8V8 129 aa15□□□□□ -0.01
HDAC4-215ENST00000543185 CCL24O00175 119 aa14.99□□□□□ -0.01
HDAC4-215ENST00000543185 H0Y9J4 135 aa14.99□□□□□ -0.01
HDAC4-215ENST00000543185 Q6ZQT7 251 aa14.99□□□□□ -0.01
HDAC4-215ENST00000543185 C17orf77Q96MU5 243 aa14.99□□□□□ -0.01
HDAC4-215ENST00000543185 K7EIM0 57 aa14.99□□□□□ -0.01
HDAC4-215ENST00000543185 IGHV3-30-3P0DP02 117 aa14.99□□□□□ -0.01
HDAC4-215ENST00000543185 CCL18P55774 89 aa14.98□□□□□ -0.01
HDAC4-215ENST00000543185 ZNF462Q96JM2 2506 aa14.98□□□□□ -0.01
HDAC4-215ENST00000543185 C14orf177Q52M58 125 aa14.98□□□□□ -0.01
HDAC4-215ENST00000543185 SERP2Q8N6R1 65 aa14.98□□□□□ -0.01
HDAC4-215ENST00000543185 PRB1P04280 392 aa14.98□□□□□ -0.01
HDAC4-215ENST00000543185 PRR30Q53SZ7 412 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-215ENST00000543185 LTBP2Q14767 1821 aa14.98□□□□□ -0.01
HDAC4-215ENST00000543185 LY6HO94772 140 aa14.97□□□□□ -0.01
HDAC4-215ENST00000543185 RPL39P62891 51 aaKnown RBP14.97□□□□□ -0.01
HDAC4-215ENST00000543185 DAND5Q8N907 189 aa14.97□□□□□ -0.01
HDAC4-215ENST00000543185 HHLA3Q9XRX5 114 aa14.97□□□□□ -0.01
HDAC4-215ENST00000543185 B9D2Q9BPU9 175 aa14.97□□□□□ -0.01
HDAC4-215ENST00000543185 IGKV1-17P01599 117 aa14.97□□□□□ -0.01
HDAC4-215ENST00000543185 TMEM263Q8WUH6 116 aaKnown RBP14.97□□□□□ -0.01
HDAC4-215ENST00000543185 LINC00173Q6ZV60 143 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 RNF223E7ERA6 249 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 MT-ATP8P03928 68 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 C9orf66Q5T8R8 295 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 NUPR1O60356 82 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 GATA1P15976 413 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-215ENST00000543185 KRTAP27-1Q3LI81 207 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 CASC2Q6XLA1 102 aa14.96□□□□□ -0.01
HDAC4-215ENST00000543185 K7EMT4 169 aa14.96□□□□□ -0.02
HDAC4-215ENST00000543185 ASPHD1Q5U4P2 390 aa14.95□□□□□ -0.02
HDAC4-215ENST00000543185 MIR7-3HGQ8N6C7 128 aa14.95□□□□□ -0.02
HDAC4-215ENST00000543185 TMEM89A2RUT3 159 aa14.95□□□□□ -0.02
HDAC4-215ENST00000543185 IGLC6P0CF74 106 aa14.95□□□□□ -0.02
HDAC4-215ENST00000543185 PTH2Q96A98 100 aa14.95□□□□□ -0.02
HDAC4-215ENST00000543185 SPRY4Q9C004 299 aa14.95□□□□□ -0.02
HDAC4-215ENST00000543185 WISP1O95388 367 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 ODF3Q96PU9 254 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 BLCAPP62952 87 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 MPLKIPQ8TAP9 179 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 CTSGP08311 255 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 A0A1B0GXF2 115 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 C2orf70A6NJV1 201 aa14.94□□□□□ -0.02
HDAC4-215ENST00000543185 SDIM1Q6ZPB5 146 aa14.93□□□□□ -0.02
HDAC4-215ENST00000543185 SPAG11BQ08648 103 aa14.93□□□□□ -0.02
HDAC4-215ENST00000543185 C19orf71A6NCJ1 209 aa14.93□□□□□ -0.02
HDAC4-215ENST00000543185 C20orf197Q8N268 126 aa14.93□□□□□ -0.02
HDAC4-215ENST00000543185 RSPO1Q2MKA7 263 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-215ENST00000543185 A0A096LPF7 62 aa14.92□□□□□ -0.02
HDAC4-215ENST00000543185 UFSP1Q6NVU6 142 aa14.92□□□□□ -0.02
HDAC4-215ENST00000543185 F8P00451 2351 aa14.92□□□□□ -0.02
HDAC4-215ENST00000543185 IGLV10-54A0A075B6I4 117 aa14.92□□□□□ -0.02
HDAC4-215ENST00000543185 IGKV2D-26A0A0A0MRZ7 120 aa14.91□□□□□ -0.02
HDAC4-215ENST00000543185 TRBV30A0A0K0K1B3 111 aa14.91□□□□□ -0.02
HDAC4-215ENST00000543185 GPHB5Q86YW7 130 aa14.91□□□□□ -0.02
HDAC4-215ENST00000543185 NAV2Q8IVL1 2488 aa14.91□□□□□ -0.02
HDAC4-215ENST00000543185 C20orf203Q8NBC4 194 aa14.91□□□□□ -0.02
HDAC4-215ENST00000543185 FAM19A3Q7Z5A8 133 aa14.91□□□□□ -0.02
HDAC4-215ENST00000543185 PRB2P02812 416 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-215ENST00000543185 NCR3O14931 201 aa14.9□□□□□ -0.02
HDAC4-215ENST00000543185 Q9HAA7 133 aa14.9□□□□□ -0.02
HDAC4-215ENST00000543185 IGHV7-81A0A0B4J1V7 117 aa14.9□□□□□ -0.02
HDAC4-215ENST00000543185 K7ENP7 123 aa14.9□□□□□ -0.02
HDAC4-215ENST00000543185 ABCA12Q86UK0 2595 aa14.9□□□□□ -0.02
HDAC4-215ENST00000543185 LRRC75A-AS1Q8N1F1 130 aa14.89□□□□□ -0.03
HDAC4-215ENST00000543185 A6NED7 52 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms