RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 UBE2E1P51965 193 aa10.64□□□□□ -0.71
PRAME-214ENST00000543184 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
PRAME-214ENST00000543184 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
PRAME-214ENST00000543184 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 SCGB1C2P0DMR2 95 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 TRAV12-2A0A075B6T6 113 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 OOSP1A8MZH6 123 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 LINC00477Q96M19 166 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 NACAE9PAV3 2078 aa10.63□□□□□ -0.71
PRAME-214ENST00000543184 NPFFO15130 113 aa10.62□□□□□ -0.71
PRAME-214ENST00000543184 SCGB1A1P11684 91 aa10.62□□□□□ -0.71
PRAME-214ENST00000543184 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
PRAME-214ENST00000543184 TRPT1Q86TN4 253 aaKnown RBP10.62□□□□□ -0.71
PRAME-214ENST00000543184 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
PRAME-214ENST00000543184 GATA3P23771 443 aa10.62□□□□□ -0.71
PRAME-214ENST00000543184 LINC00315P59091 139 aa10.62□□□□□ -0.71
PRAME-214ENST00000543184 GEMIN7Q9H840 131 aaKnown RBP10.62□□□□□ -0.71
PRAME-214ENST00000543184 AVPP01185 164 aa10.61□□□□□ -0.71
PRAME-214ENST00000543184 C1orf122Q6ZSJ8 110 aa10.61□□□□□ -0.71
PRAME-214ENST00000543184 PF4V1P10720 104 aa10.61□□□□□ -0.71
PRAME-214ENST00000543184 MRPL53Q96EL3 112 aaKnown RBP10.61□□□□□ -0.71
PRAME-214ENST00000543184 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 SOCS3O14543 225 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
PRAME-214ENST00000543184 BLCAPP62952 87 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 BEX4Q9NWD9 120 aaPredicted RBP10.6□□□□□ -0.71
PRAME-214ENST00000543184 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 A6NJY4 79 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 UBE2D3P61077 147 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 UBE2D2P62837 147 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 Q6ZUT4 128 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 ANKRD29Q8N6D5 301 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 RHPN1-AS1Q9BWJ2 59 aa10.6□□□□□ -0.71
PRAME-214ENST00000543184 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 ELANEP08246 267 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 KIF25-AS1Q9Y6Z4 181 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 CR1P17927 2039 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 PMVKQ15126 192 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 TMEM95Q3KNT9 176 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
PRAME-214ENST00000543184 A0A096LNT2 108 aa10.58□□□□□ -0.72
PRAME-214ENST00000543184 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
PRAME-214ENST00000543184 NSD1Q96L73 2696 aaPredicted RBP10.58□□□□□ -0.72
PRAME-214ENST00000543184 A4D1N5 150 aa10.58□□□□□ -0.72
PRAME-214ENST00000543184 LINC01619G3V211 115 aa10.58□□□□□ -0.72
PRAME-214ENST00000543184 MSMBP08118 114 aa10.58□□□□□ -0.72
PRAME-214ENST00000543184 IGHV4-38-2P0DP08 117 aa10.58□□□□□ -0.72
PRAME-214ENST00000543184 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 OVOL1O14753 267 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 HTN1P15515 57 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 NPC2P61916 151 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 C9JAW5 83 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 PRM2P04554 102 aa10.57□□□□□ -0.72
PRAME-214ENST00000543184 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
PRAME-214ENST00000543184 J3QQQ9 107 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 ZNF56Q15929 161 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 RNF183Q96D59 192 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 HERVK_113P61574 105 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 AMELXQ99217 191 aa10.56□□□□□ -0.72
PRAME-214ENST00000543184 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
PRAME-214ENST00000543184 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
PRAME-214ENST00000543184 TEN1Q86WV5 123 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 DUX5Q96PT3 197 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 A8MWV9 139 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 IGHV4-31P0DP07 118 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 Q6ZSV7 163 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
PRAME-214ENST00000543184 ANK3Q12955 4377 aaKnown RBP10.55□□□□□ -0.72
PRAME-214ENST00000543184 A0A0J9YXV3 536 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 B4DSR2 109 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 MUSTN1Q8IVN3 82 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 PPDPFLQ8WWR9 84 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 FAM19A4Q96LR4 140 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 PRO1854Q9UHT4 67 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 LENEPQ9Y5L5 61 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 A8MZ25 164 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 P0DMU3 169 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 FAM231AP0DMU4 169 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 FAM231CP0DMU5 169 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 ATRQ13535 2644 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 H3BUX3 64 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 Q1RN00 199 aa10.54□□□□□ -0.72
PRAME-214ENST00000543184 NDUFA4O00483 81 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 VCYO14598 125 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 TCTEX1D4Q5JR98 221 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 Q9UF83 564 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 PROK1P58294 105 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 DSCR9P59020 149 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
PRAME-214ENST00000543184 C19orf54Q5BKX5 351 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms