RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 HELZ2Q9BYK8 2649 aaKnown RBP12.79□□□□□ -0.36
NELFA-216ENST00000542778 TRBV10-2A0A0K0K1G8 114 aa12.79□□□□□ -0.36
NELFA-216ENST00000542778 UBE2E1P51965 193 aa12.79□□□□□ -0.36
NELFA-216ENST00000542778 ZNRF2Q8NHG8 242 aa12.79□□□□□ -0.36
NELFA-216ENST00000542778 TEX15Q9BXT5 2789 aa12.79□□□□□ -0.36
NELFA-216ENST00000542778 MXRA5Q9NR99 2828 aa12.79□□□□□ -0.36
NELFA-216ENST00000542778 GPHB5Q86YW7 130 aa12.79□□□□□ -0.36
NELFA-216ENST00000542778 LGALS3P17931 250 aaKnown RBP12.78□□□□□ -0.36
NELFA-216ENST00000542778 Q8N6K4 173 aa12.78□□□□□ -0.36
NELFA-216ENST00000542778 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
NELFA-216ENST00000542778 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
NELFA-216ENST00000542778 MRPL23Q16540 153 aaKnown RBP12.78□□□□□ -0.36
NELFA-216ENST00000542778 HIST2H2BCQ6DN03 193 aa12.78□□□□□ -0.36
NELFA-216ENST00000542778 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 IGHV4-38-2P0DP08 117 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 Q1RN00 199 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 MINOS1Q5TGZ0 78 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 MUSTN1Q8IVN3 82 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 MINOS1-NBL1R4GNA1 71 aa12.77□□□□□ -0.37
NELFA-216ENST00000542778 CLPSL1A2RUU4 121 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 NPFFO15130 113 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 TMEM219Q86XT9 240 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 PPP1R17O96001 155 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 AVPP01185 164 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 IGF1P05019 195 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 RPL39P62891 51 aaKnown RBP12.76□□□□□ -0.37
NELFA-216ENST00000542778 LINC01587Q99440 93 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 CHCHD5Q9BSY4 110 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 TMEM126AQ9H061 195 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
NELFA-216ENST00000542778 ZNF876PQ49A33 203 aa12.75□□□□□ -0.37
NELFA-216ENST00000542778 Q8N9W7 124 aa12.75□□□□□ -0.37
NELFA-216ENST00000542778 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
NELFA-216ENST00000542778 BEX4Q9NWD9 120 aaPredicted RBP12.75□□□□□ -0.37
NELFA-216ENST00000542778 J3KRW8 73 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 S100A4P26447 101 aaKnown RBP12.74□□□□□ -0.37
NELFA-216ENST00000542778 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 PPDPFQ9H3Y8 114 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 TRIAP1O43715 76 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 TLN2Q9Y4G6 2542 aa12.74□□□□□ -0.37
NELFA-216ENST00000542778 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.73□□□□□ -0.37
NELFA-216ENST00000542778 IGHV7-81A0A0B4J1V7 117 aa12.73□□□□□ -0.37
NELFA-216ENST00000542778 EBI3Q14213 229 aa12.73□□□□□ -0.37
NELFA-216ENST00000542778 C2orf82Q6UX34 121 aa12.73□□□□□ -0.37
NELFA-216ENST00000542778 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
NELFA-216ENST00000542778 IGHV3-49A0A0A0MS15 119 aa12.72□□□□□ -0.37
NELFA-216ENST00000542778 ZNF56Q15929 161 aa12.72□□□□□ -0.37
NELFA-216ENST00000542778 CCDC168Q8NDH2 2452 aa12.72□□□□□ -0.37
NELFA-216ENST00000542778 H7C423 109 aa12.72□□□□□ -0.37
NELFA-216ENST00000542778 LEPROTO15243 131 aa12.72□□□□□ -0.37
NELFA-216ENST00000542778 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
NELFA-216ENST00000542778 TRBV7-7A0A0K0K1E9 115 aa12.71□□□□□ -0.37
NELFA-216ENST00000542778 C15orf32Q32M92 178 aa12.71□□□□□ -0.37
NELFA-216ENST00000542778 CUBNO60494 3623 aa12.71□□□□□ -0.37
NELFA-216ENST00000542778 FAM240AA0A1B0GVK7 77 aa12.71□□□□□ -0.37
NELFA-216ENST00000542778 LINC00527Q9UJ94 153 aa12.71□□□□□ -0.37
NELFA-216ENST00000542778 ITPR2Q14571 2701 aa12.71□□□□□ -0.38
NELFA-216ENST00000542778 TMEM223A0PJW6 202 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 OOSP1A8MZH6 123 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 POLR2KP53803 58 aaKnown RBP12.7□□□□□ -0.38
NELFA-216ENST00000542778 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 LENEPQ9Y5L5 61 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 TRAV21A0A0B4J279 112 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 G3V318 75 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 MSMBP08118 114 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 ID1P41134 155 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 MUC4Q99102 2169 aa12.7□□□□□ -0.38
NELFA-216ENST00000542778 M0R2P5 195 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 MED14OSP0DP75 135 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 ECSCRQ19T08 205 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 GCN1Q92616 2671 aaKnown RBP12.69□□□□□ -0.38
NELFA-216ENST00000542778 IGHV4OR15-8A0A075B7B6 117 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 A0A087WW49 117 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 H3BT86 120 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 ATP6V0E1O15342 81 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 LINC00315P59091 139 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 LY6EQ16553 131 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 ITPR3Q14573 2671 aa12.69□□□□□ -0.38
NELFA-216ENST00000542778 C16orf92Q96LL3 132 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 C20orf173Q96LM9 149 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 DUX3Q96PT4 197 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 CR1P17927 2039 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 DEFB121Q5J5C9 76 aa12.68□□□□□ -0.38
NELFA-216ENST00000542778 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
NELFA-216ENST00000542778 A0A096LNT2 108 aa12.67□□□□□ -0.38
NELFA-216ENST00000542778 VCYO14598 125 aa12.67□□□□□ -0.38
NELFA-216ENST00000542778 RNASE3P12724 160 aaKnown RBP12.67□□□□□ -0.38
NELFA-216ENST00000542778 METTL26Q96S19 204 aa12.67□□□□□ -0.38
NELFA-216ENST00000542778 ICOSQ9Y6W8 199 aa12.67□□□□□ -0.38
NELFA-216ENST00000542778 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
NELFA-216ENST00000542778 GNRH2O43555 120 aa12.67□□□□□ -0.38
NELFA-216ENST00000542778 A0A0J9YX75 114 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms